Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00676 ATGGCGGCGCCGAATAGAATCGAACGCGCTCACCAGATGTACCGTGAAGGACGATACGAGGAGGCGTTAGGGTTCTACACAGAGGCAATCGCCTTGGCCAAGACTAACCCACAGAAGATCGCGTTGCATAGCAATCGAGCGGCGTGCTTTCTGAAGCTTCACGATTTCAAAAAGGCAGCAGAAGAGTGTACCTCGGTGCTTGAGCTTGATCAAAAGCACAGTGGGGCATTGATGCTGCGGGCTCAAACGCTAGTCACCCTGAAGGAGTACCATTCAGCTCTTTTTGATGTCAACAGACTGTTAGAGTTGAATCCATCTTCAGAGGTTTATCAAAATCTTCAAGCTCGCTTGAAGACACAGTTGTCACTTGCTCCAATACCAGAATCAGAAGAGGAGTTTGAAGAACAAGAAGACGAGGAGCCTGAACTGATAATTGAAGGGGAGAAGGAAAAAGAAGAGATAGGAGAGAAATATTCTTCGATTTCTAATATTAGGACAGAACAGAAGGATGAACTTGGTAAAGGCATTGTTAGTACTGAATGCGCTGCTCATGAAGCAGACCTCAAGTTTTCAATGAAGCAAGGGAGAAACCAAAACCATGACTCTAAGAAGTTTACAGCAGATGCTATAGCTCCTAAAGCACCAAGCAGGGAATCAAATGAGAGACATTCAAAAGGATGGCAAACAATTCCAAAACCAAAAGGACATTCAGCTCTAGACTATGCTCGGTGGGATAGTGTTGAAGATGATTCTAGTGATGATAATAGTGACAATGAAGAAGAAGAATCTTTGCCTCAATACCGCTTTCGTGTAAGAACAGTTGGTGTCCGTCCTGTAAAGTGA 843 0.4437 MAAPNRIERAHQMYREGRYEEALGFYTEAIALAKTNPQKIALHSNRAACFLKLHDFKKAAEECTSVLELDQKHSGALMLRAQTLVTLKEYHSALFDVNRLLELNPSSEVYQNLQARLKTQLSLAPIPESEEEFEEQEDEEPELIIEGEKEKEEIGEKYSSISNIRTEQKDELGKGIVSTECAAHEADLKFSMKQGRNQNHDSKKFTADAIAPKAPSRESNERHSKGWQTIPKPKGHSALDYARWDSVEDDSSDDNSDNEEEESLPQYRFRVRTVGVRPVK* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00676 280 Pfam Tetratricopeptide repeat 52 117 - -
Phac5g00676 280 SUPERFAMILY TPR-like 7 121 IPR011990 GO:0005515
Phac5g00676 280 Gene3D Tetratricopeptide repeat domain 2 146 IPR011990 GO:0005515
Phac5g00676 280 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 2 280 - -
Phac5g00676 280 MobiDBLite consensus disorder prediction 127 162 - -
Phac5g00676 280 SMART tpr_5 3 36 IPR019734 GO:0005515
Phac5g00676 280 SMART tpr_5 74 107 IPR019734 GO:0005515
Phac5g00676 280 SMART tpr_5 40 73 IPR019734 GO:0005515
Phac5g00676 280 MobiDBLite consensus disorder prediction 191 280 - -
Phac5g00676 280 MobiDBLite consensus disorder prediction 191 207 - -
Phac5g00676 280 MobiDBLite consensus disorder prediction 128 146 - -
Phac5g00676 280 MobiDBLite consensus disorder prediction 147 162 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00676 2 121 Calmodulin-binding Proteins AT3G25230 32.576 4.05e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00676 - - gmx:100792046 425.246