Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00667 ATGCAGACACATCAATACAATTCCATGGAATCTAGAAATGAGGAATTTCATTCTGCATCGCAATTGGTCCCACAAGACCTTCGTGATGGCATGCATATCAATGCACGACCTCCAGCTTATAACATGTCAGAAAATAAACCTGTGCTTAATTATTCCATACAGACAGGTGAGGAATTTGCTTTTGAGTTTATGAGTAATAGGGTGAATCTGAAGAAACCTCCCTTTCCAAATGTTGTGGGTGATCCCAACTATTCAACAGGCTATATGGAATTGAAAGGCATTTTGGGACATACAGGATCTGAGAGTGGATCTGATATATCTGTGCTCACAAAGACTGAGAAGGGTCCAAAAGAGTTTGACAGAAGGAACTCTTCTCAACACCAGGACAGAAGTAATTATGGTTCAGCTCGATCAATTCCTAGAACTTCATCTAATCAAGAAAGTTACCGAGTCCTTCATGGTACTGCCTCTTCCAGTGCATCTGAAATTTCATCCGTGAAGATGAAGGTTCTATGCAGCTTTGGGGGTAGAATATTGCCAAGGCCTGGTGATGGAAAACTTAGATATGTTGGGGGTGAAACGCGTATTATTACTATAAGAAGGGACATACGTTTTCAGGAGCTTATGCAGAAAACATCATTAATTTATAGTGAAGCTCACGTGATAAAGTATCAGCTCCCTGGAGAAGATCTTGATGCGTTAGTTTCAGTATCTTCTGATGAGGATCTGCGGAATATGATGGAGGAATGCCATGATTTACAAGGCGAACGAGGATCAACAAAGCTTAGGATGTTTCTGTTCTCTATAAATGATTTGGATGATACTCAGTTTGGCATAGGAAGCATTGACGGTGATTCTGAAATCCAGTATGTAGTTGCTGTCAATGGCATGAACATGGATTCAAGAAACAACTCAATCCTTCATGCTGCAAGTGGCTCTACCAATAACTTGCATGAATTGAATGAACAAAATAATGAGAGGGAGACCAACAGAGTTTTGATGGACTCATTTGGTGTTAGTAGCCCATCTTTGGCTGACAATGTTAAATCATCATTGACTATTCAATCTTCACAACAAATGCTTCCAATCTCCTCTAATGCTTATGATACCCATCCATTGTTTTATGATGACCAGGTTATTCACCAAGGGGAAGCTAGTCAATATCCACTACAGCACGGTCTTGGTCCTTCTAACAACTCCGCTCGCAATCTTGGAGAGATTCCAGTTTCTATGCCTATTCATAATCTTGTTAACCAAGGGATCATGAATGATGGACAAACATCTAGTGAGTTTCAGGTACAAATTTCAGCTGTGCCAGACATGTTGGTAAAAAGAAAGGGTGATAATTTCATTCATACAGGCAATGATACAGGAAAAGTTTTCCCCTTGGAAGCACCATATCCTATTGCTTTGCAGCCATTTGAGGGGAATTTACAAGCTAATTTACCAGAGGCACCATTTACTGCTGCTATATCAGAAGGCCTTCATCCTGCACTGCCATCAAAGAACAAGAGTAAGCACCAGCAGTCTGAAGATGCCTATTCATTAATAGGTAGTATGAATCCCACACAGACTCCTAAGTCTGGTGAAGATGATTTCTATACTACACCCACTGATGCATTCAGCCGTGCTCAGGTTGATGCTGAGTCCAATGTGATTGATTTCGGTTGCCTTGAACCACCTCCACTTCCCAACAGAGTCTATTATTCAGAGAGAATTCCAAGGGAGCAGGCAGATTTGCTGAATCGATCTACAAAGTCAGATGATGCGCATGGTTCTCACTTACTCATGTCAGATTTGCTTTCTGACTTCAGCCAGAAGAATTCAGAAACAGAATCCAACGACATATCGCACAATGGGAATATGTCAAATCTGAACATTATGTCCAGCTCAGCACCAAAGCCTTTGCAAGCAGATGGTAATACCACTGATGATGGATTTGCCCCACCACCAACATACAAAAAATGGCCTGATACAACAAATAAGTTGAATTCAAAGTTATCACTGCATGTGAATTCTGAGTTGAAGCAAGTGTCAGCAGATAATAAAGTTTCTAGAATTGAGGACCAGGTCCTTTATTCTGAAACCAATCGCTCCAAAGACAACCATAACATCCTCTTAGTTGATGAAACCAAAGGTACTGGACATCTAGCATTTCACCAGGTTCTTCCTGTTGAAAATCTGAATCTAGTATCGAAACCTCCAGACCTCAATTTGGTTGAAGTTTCTACCAGGGAATTGGATAACGGTACCAAGGTTCAAGCTCTGCCTTTTCCTTCAACTGGAAACACAGGCCAAGATGTTTCTCAAAATTTCCCCCCAGAAGTTAAACCAAGATCTACTACTCAGGGAGACATTCTTATTGATATTGAGGACAGGTTTCCCCGTGAGATCCTTTATGATATGTTCTCCAAGGCAATACTTTCCGAAGATTCCTCAAGTATTGGTCCGTTACCAACAGATAGAGCAGGTTTGAGCTTAAACATGGACAATCATGAGCCTAAACGTTGGTCATATTTTCAGAACTTTGCCCAAGAGGGGTTTGATAATGTTTCTCTAATTGATCAGGACAATCTTGGTTTTTCGTCTGCAGTGAGGAAAGTTCAAGATGGGGATAGTAAATCTCAGCAGTCTGCTGCTCTACTGGCAGATGGTGCTTTGGCAGGACACAAGGAATCCCACCTAAATTTCGCTGGTGGCGAAAATCAGAAAAATGTACCGGCAACAACTAAGATAGAATCAACTCTCTCTCAACAAAAATATGAGCATTCCCAACTAAAGGGCAATGAAAATAAGAACTTAGACGCCATAACGGAAAATGCAAGACCACAGGAATCTGAATACCAGGAGGATGACAAGAATGAAGCAAGGAATGTGGGTTTAGCAGGGGATTTTGACATCAGTACTGTGCAGTTCATAAAGAATGATGATCTTGAAGAGCAGCGAGAGCTGGGTTCTGGTACCTTTGGGACTGTATACCATGGAAAGTGGAGGGGATCGGATGTTGCTATTAAAAGAATAAAGAAAAGCTGTTTCGCTGGTCGATCTTCAGAACAAGAGAGACTGACCATAGAATTCTGGCGTGAAGCTGACATACTTTCCAAGCTTCACCATCCAAATGTGGTGGCATTTTATGGTGTAGTTCAGGATGGACCAGGAGCAACATTAGCGACTGTCACTGAGTACATGGTGGATGGTTCTCTCAGGACTGTTTTGCTTCGTAAGGATAGATATCTTGATCGCCGTAAGAGGTTGATAATAGCCATGGATGCAGCTTTTGGAATGGAATATTTACACTCAAAAGATATCGTGCATTTTGACTTGAAATGTGACAATTTGCTTGTGAACTTGAAGGATCCTTTACGGCCAATATGCAAGGTTGGTGATTTTGGCCTATCAAAAATTAAGAGAAACACCCTGGTGTCTGGTGGTGTTCGTGGAACTCTACCTTGGATGGCACCAGAGCTTCTAAACGGTAGCAGCAATAAGGTCTCAGAAAAGGTTGATGTCTTCTCTTTCGGCATTGTCTTATGGGAGATTCTTACCGGTGAAGAGCCATATGCTAATATGCACTATGGTGCAATTATTGGAGGTATTGTGAATAACACATTGAGACCTACAATCCCAAGTTACTGTGATCTTGAGTGGAAAACACTAATGGAGCAGTGTTGGGCACCCAATCCTGCAGTTAGGCCATCCTTCACAGAAATTGCTCGCCGTTTGCGTGTGATGTCTGCAGCTGCTATTCAGAACAAAGGACAGCTCCACAAGGCATCTAAATGA 3783 0.4166 MQTHQYNSMESRNEEFHSASQLVPQDLRDGMHINARPPAYNMSENKPVLNYSIQTGEEFAFEFMSNRVNLKKPPFPNVVGDPNYSTGYMELKGILGHTGSESGSDISVLTKTEKGPKEFDRRNSSQHQDRSNYGSARSIPRTSSNQESYRVLHGTASSSASEISSVKMKVLCSFGGRILPRPGDGKLRYVGGETRIITIRRDIRFQELMQKTSLIYSEAHVIKYQLPGEDLDALVSVSSDEDLRNMMEECHDLQGERGSTKLRMFLFSINDLDDTQFGIGSIDGDSEIQYVVAVNGMNMDSRNNSILHAASGSTNNLHELNEQNNERETNRVLMDSFGVSSPSLADNVKSSLTIQSSQQMLPISSNAYDTHPLFYDDQVIHQGEASQYPLQHGLGPSNNSARNLGEIPVSMPIHNLVNQGIMNDGQTSSEFQVQISAVPDMLVKRKGDNFIHTGNDTGKVFPLEAPYPIALQPFEGNLQANLPEAPFTAAISEGLHPALPSKNKSKHQQSEDAYSLIGSMNPTQTPKSGEDDFYTTPTDAFSRAQVDAESNVIDFGCLEPPPLPNRVYYSERIPREQADLLNRSTKSDDAHGSHLLMSDLLSDFSQKNSETESNDISHNGNMSNLNIMSSSAPKPLQADGNTTDDGFAPPPTYKKWPDTTNKLNSKLSLHVNSELKQVSADNKVSRIEDQVLYSETNRSKDNHNILLVDETKGTGHLAFHQVLPVENLNLVSKPPDLNLVEVSTRELDNGTKVQALPFPSTGNTGQDVSQNFPPEVKPRSTTQGDILIDIEDRFPREILYDMFSKAILSEDSSSIGPLPTDRAGLSLNMDNHEPKRWSYFQNFAQEGFDNVSLIDQDNLGFSSAVRKVQDGDSKSQQSAALLADGALAGHKESHLNFAGGENQKNVPATTKIESTLSQQKYEHSQLKGNENKNLDAITENARPQESEYQEDDKNEARNVGLAGDFDISTVQFIKNDDLEEQRELGSGTFGTVYHGKWRGSDVAIKRIKKSCFAGRSSEQERLTIEFWREADILSKLHHPNVVAFYGVVQDGPGATLATVTEYMVDGSLRTVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKDIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDLEWKTLMEQCWAPNPAVRPSFTEIARRLRVMSAAAIQNKGQLHKASK* 1261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00667 1260 MobiDBLite consensus disorder prediction 606 638 - -
Phac5g00667 1260 MobiDBLite consensus disorder prediction 128 153 - -
Phac5g00667 1260 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 187 269 - -
Phac5g00667 1260 CDD PB1_UP2 171 267 - -
Phac5g00667 1260 SUPERFAMILY Protein kinase-like (PK-like) 970 1240 IPR011009 -
Phac5g00667 1260 PRINTS Tyrosine kinase catalytic domain signature 1060 1073 IPR001245 GO:0004672|GO:0006468
Phac5g00667 1260 PRINTS Tyrosine kinase catalytic domain signature 1097 1115 IPR001245 GO:0004672|GO:0006468
Phac5g00667 1260 PRINTS Tyrosine kinase catalytic domain signature 1212 1234 IPR001245 GO:0004672|GO:0006468
Phac5g00667 1260 PRINTS Tyrosine kinase catalytic domain signature 1168 1190 IPR001245 GO:0004672|GO:0006468
Phac5g00667 1260 Pfam Protein tyrosine and serine/threonine kinase 979 1241 IPR001245 GO:0004672|GO:0006468
Phac5g00667 1260 Pfam PB1 domain 184 267 IPR000270 GO:0005515
Phac5g00667 1260 MobiDBLite consensus disorder prediction 606 659 - -
Phac5g00667 1260 CDD STKc_MAP3K-like 984 1241 - -
Phac5g00667 1260 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 971 1065 - -
Phac5g00667 1260 SUPERFAMILY CAD & PB1 domains 184 275 - -
Phac5g00667 1260 SMART PB1_new 182 269 IPR000270 GO:0005515
Phac5g00667 1260 MobiDBLite consensus disorder prediction 112 127 - -
Phac5g00667 1260 Gene3D - 186 269 - -
Phac5g00667 1260 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1103 1115 IPR008271 GO:0004672|GO:0006468
Phac5g00667 1260 MobiDBLite consensus disorder prediction 756 778 - -
Phac5g00667 1260 MobiDBLite consensus disorder prediction 112 153 - -
Phac5g00667 1260 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1066 1258 - -
Phac5g00667 1260 ProSiteProfiles Protein kinase domain profile. 978 1243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g00667 1260 Gene3D Transferase(Phosphotransferase) domain 1 1065 1260 - -
Phac5g00667 1260 SMART serkin_6 978 1244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g00667 1260 MobiDBLite consensus disorder prediction 756 780 - -
Phac5g00667 1260 ProSitePatterns Protein kinases ATP-binding region signature. 984 1009 IPR017441 GO:0005524
Phac5g00667 1260 Gene3D Phosphorylase Kinase; domain 1 965 1064 - -
Phac5g00667 1260 PANTHER SERINE-THREONINE PROTEIN KINASE 212 1242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00667 Phac-Chr5 5985492 5994334 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00667 34 618 MAP Kinase Kinase Kinase AT1G16270 38.522 4.33e-97 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Phac5g00667 PK_Tyr_Ser-Thr 1.2e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00667 - - var:108333936 2273.05