LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac5g00666	ATGCAGACACATCAATACAATTCCATGGAATCTAGAAATGAGGAATTTCATTCTGCATCGCAATTGGTCCCACAAGACCTTCGTGATGGCATGCATATCAATGCACGACCTCCAGCTTATAACATGTCAGAAAATAAACCTGTGCTTAATTATTCCATACAGACAGGTGAGGAATTTGCTTTTGAGTTTATGAGTAATAGGGTGAATCTGAAGAAACCTCCCTTTCCAAATGTTGTGGGTGATCCCAACTATTCAACAGGCTATATGGAATTGAAAGGCATTTTGGGACATACAGGATCTGAGAGTGGATCTGATATATCTGTGCTCACAAAGACTGAGAAGGGTCCAAAAGAGTTTGACAGAAGGAACTCTTCTCAACACCAGGACAGAAGTAATTATGGTTCAGCTCGATCAATTCCTAGAACTTCATCTAATCAAGAAAGTTACCGAGTCCTTCATGGTACTGCCTCTTCCAGTGCATCTGAAATTTCATCCGTGAAGATGAAGGTTCTATGCAGCTTTGGGGGTAGAATATTGCCAAGGCCTGGTGATGGAAAACTTAGATATGTTGGGGGTGAAACGCGTATTATTACTATAAGAAGGGACATACGTTTTCAGGAGCTTATGCAGAAAACATCATTAATTTATAGTGAAGCTCACGTGATAAAGTATCAGCTCCCTGGAGAAGATCTTGATGCGTTAGTTTCAGTATCTTCTGATGAGGATCTGCGGAATATGATGGAGGAATGCCATGATTTACAAGGCGAACGAGGATCAACAAAGCTTAGGATGTTTCTGTTCTCTATAAATGATTTGGATGATACTCAGTTTGGCATAGGAAGCATTGACGGTGATTCTGAAATCCAGTATGTAGTTGCTGTCAATGGCATGAACATGGATTCAAGAAACAACTCAATCCTTCATGCTGCAAGTGGCTCTACCAATAACTTGCATGAATTGAATGAACAAAATAATGAGAGGGAGACCAACAGAGTTTTGATGGACTCATTTGGTGTTAGTAGCCCATCTTTGGCTGACAATGTTAAATCATCATTGACTATTCAATCTTCACAACAAATGCTTCCAATCTCCTCTAATGCTTATGATACCCATCCATTGTTTTATGATGACCAGGTTATTCACCAAGGGGAAGCTAGTCAATATCCACTACAGCACGGTCTTGGTCCTTCTAACAACTCCGCTCGCAATCTTGGAGAGATTCCAGTTTCTATGCCTATTCATAATCTTGTTAACCAAGGGATCATGAATGATGGACAAACATCTAGTGAGTTTCAGGTACAAATTTCAGCTGTGCCAGACATGTTGGTAAAAAGAAAGGGTGATAATTTCATTCATACAGGCAATGATACAGGAAAAGTTTTCCCCTTGGAAGCACCATATCCTATTGCTTTGCAGCCATTTGAGGGGAATTTACAAGCTAATTTACCAGAGGCACCATTTACTGCTGCTATATCAGAAGGCCTTCATCCTGCACTGCCATCAAAGAACAAGAGTAAGCACCAGCAGTCTGAAGATGCCTATTCATTAATAGGTAGTATGAATCCCACACAGACTCCTAAGTCTGGTGAAGATGATTTCTATACTACACCCACTGATGCATTCAGCCGTGCTCAGGTTGATGCTGAGTCCAATGTGATTGATTTCGGTTGCCTTGAACCACCTCCACTTCCCAACAGAGTCTATTATTCAGAGAGAATTCCAAGGGAGCAGGCAGATTTGCTGAATCGATCTACAAAGTCAGATGATGCGCATGGTTCTCACTTACTCATGTCAGATTTGCTTTCTGACTTCAGCCAGAAGAATTCAGAAACAGAATCCAACGACATATCGCACAATGGGAATATGTCAAATCTGAACATTATGTCCAGCTCAGCACCAAAGCCTTTGCAAGCAGATGGTAATACCACTGATGATGGATTTGCCCCACCACCAACATACAAAAAATGGCCTGATACAACAAATAAGTTGAATTCAAAGTTATCACTGCATGTGAATTCTGAGTTGAAGCAAGTGTCAGCAGATAATAAAGTTTCTAGAATTGAGGACCAGGTCCTTTATTCTGAAACCAATCGCTCCAAAGACAACCATAACATCCTCTTAGTTGATGAAACCAAAGGTACTGGACATCTAGCATTTCACCAGGTTCTTCCTGTTGAAAATCTGAATCTAGTATCGAAACCTCCAGACCTCAATTTGGTTGAAGTTTCTACCAGGGAATTGGATAACGGTACCAAGGTTCAAGCTCTGCCTTTTCCTTCAACTGGAAACACAGGCCAAGATGTTTCTCAAAATTTCCCCCCAGAAGTTAAACCAAGATCTACTACTCAGGGAGACATTCTTATTGATATTGAGGACAGGTTTCCCCGTGAGATCCTTTATGATATGTTCTCCAAGGCAATACTTTCCGAAGATTCCTCAAGTATTGGTCCGTTACCAACAGATAGAGCAGGTTTGAGCTTAAACATGGACAATCATGAGCCTAAACGTTGGTCATATTTTCAGAACTTTGCCCAAGAGGGGTTTGATAATGTTTCTCTAATTGATCAGGACAATCTTGGTTTTTCGTCTGCAGTGAGGAAAGTTCAAGATGGGGATAGTAAATCTCAGCAGTCTGCTGCTCTACTGGCAGATGGTGCTTTGGCAGGACACAAGGAATCCCACCTAAATTTCGCTGGTGGCGAAAATCAGAAAAATGTACCGGCAACAACTAAGATAGAATCAACTCTCTCTCAACAAAAATATGAGCATTCCCAACTAAAGGGCAATGAAAATAAGAACTTAGACGCCATAACGGAAAATGCAAGACCACAGGAATCTGAATACCAGGAGGATGACAAGAATGAAGCAAGGAATGTGGGTTTAGCAGGGGATTTTGACATCAGTACTGTGCAGTTCATAAAGAATGATGATCTTGAAGAGCAGCGAGAGCTGGGTTCTGGTACCTTTGGGACTGTATACCATGGAAAGTGGAGGGGATCGGATGTTGCTATTAAAAGAATAAAGAAAAGCTGTTTCGCTGGTCGATCTTCAGAACAAGAGAGACTGACCATAGAATTCTGGCGTGAAGCTGACATACTTTCCAAGCTTCACCATCCAAATGTGGTGGCATTTTATGGTGTAGTTCAGGATGGACCAGGAGCAACATTAGCGACTGTCACTGAGTACATGGTGGATGGTTCTCTCAGGACTGTTTTGCTTCGTAAGGATAGATATCTTGATCGCCGTAAGAGGTTGATAATAGCCATGGATGCAGCTTTTGGAATGGAATATTTACACTCAAAAGATATCGTGCATTTTGACTTGAAATGTGACAATTTGCTTGTGAACTTGAAGGATCCTTTACGGCCAATATGCAAGGTTGGTGATTTTGGCCTATCAAAAATTAAGAGAAACACCCTGGTGTCTGGTGGTGTTCGTGGAACTCTACCTTGGATGGCACCAGAGCTTCTAAACGGTAGCAGCAATAAGGTCTCAGAAAAGGTTGATGTCTTCTCTTTCGGCATTGTCTTATGGGAGATTCTTACCGGTGAAGAGCCATATGCTAATATGCACTATGGTGCAATTATTGGAGGTATTGTGAATAACACATTGAGACCTACAATCCCAAGTTACTGTGATCTTGAGTGGAAAACACTAATGGAGCAGTGTTGGGCACCCAATCCTGCAGTTAGGCCATCCTTCACAGAAATTGCTCGCCGTTTGCGTGTGATGTCTGCAGCTGCTATTCAGAACAAAGGACAGCTCCACAAGGCATCTAAATGA	3783	0.4166	MQTHQYNSMESRNEEFHSASQLVPQDLRDGMHINARPPAYNMSENKPVLNYSIQTGEEFAFEFMSNRVNLKKPPFPNVVGDPNYSTGYMELKGILGHTGSESGSDISVLTKTEKGPKEFDRRNSSQHQDRSNYGSARSIPRTSSNQESYRVLHGTASSSASEISSVKMKVLCSFGGRILPRPGDGKLRYVGGETRIITIRRDIRFQELMQKTSLIYSEAHVIKYQLPGEDLDALVSVSSDEDLRNMMEECHDLQGERGSTKLRMFLFSINDLDDTQFGIGSIDGDSEIQYVVAVNGMNMDSRNNSILHAASGSTNNLHELNEQNNERETNRVLMDSFGVSSPSLADNVKSSLTIQSSQQMLPISSNAYDTHPLFYDDQVIHQGEASQYPLQHGLGPSNNSARNLGEIPVSMPIHNLVNQGIMNDGQTSSEFQVQISAVPDMLVKRKGDNFIHTGNDTGKVFPLEAPYPIALQPFEGNLQANLPEAPFTAAISEGLHPALPSKNKSKHQQSEDAYSLIGSMNPTQTPKSGEDDFYTTPTDAFSRAQVDAESNVIDFGCLEPPPLPNRVYYSERIPREQADLLNRSTKSDDAHGSHLLMSDLLSDFSQKNSETESNDISHNGNMSNLNIMSSSAPKPLQADGNTTDDGFAPPPTYKKWPDTTNKLNSKLSLHVNSELKQVSADNKVSRIEDQVLYSETNRSKDNHNILLVDETKGTGHLAFHQVLPVENLNLVSKPPDLNLVEVSTRELDNGTKVQALPFPSTGNTGQDVSQNFPPEVKPRSTTQGDILIDIEDRFPREILYDMFSKAILSEDSSSIGPLPTDRAGLSLNMDNHEPKRWSYFQNFAQEGFDNVSLIDQDNLGFSSAVRKVQDGDSKSQQSAALLADGALAGHKESHLNFAGGENQKNVPATTKIESTLSQQKYEHSQLKGNENKNLDAITENARPQESEYQEDDKNEARNVGLAGDFDISTVQFIKNDDLEEQRELGSGTFGTVYHGKWRGSDVAIKRIKKSCFAGRSSEQERLTIEFWREADILSKLHHPNVVAFYGVVQDGPGATLATVTEYMVDGSLRTVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKDIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDLEWKTLMEQCWAPNPAVRPSFTEIARRLRVMSAAAIQNKGQLHKASK*	1261

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac5g00666	1260	MobiDBLite	consensus disorder prediction	606	638	-	-
	Phac5g00666	1260	MobiDBLite	consensus disorder prediction	128	153	-	-
	Phac5g00666	1260	FunFam	Octicosapeptide/phox/Bem1p domain kinase superfamily protein	187	269	-	-
	Phac5g00666	1260	CDD	PB1_UP2	171	267	-	-
	Phac5g00666	1260	SUPERFAMILY	Protein kinase-like (PK-like)	970	1240	IPR011009	-
	Phac5g00666	1260	PRINTS	Tyrosine kinase catalytic domain signature	1060	1073	IPR001245	GO:0004672\|GO:0006468
	Phac5g00666	1260	PRINTS	Tyrosine kinase catalytic domain signature	1097	1115	IPR001245	GO:0004672\|GO:0006468
	Phac5g00666	1260	PRINTS	Tyrosine kinase catalytic domain signature	1212	1234	IPR001245	GO:0004672\|GO:0006468
	Phac5g00666	1260	PRINTS	Tyrosine kinase catalytic domain signature	1168	1190	IPR001245	GO:0004672\|GO:0006468
	Phac5g00666	1260	Pfam	Protein tyrosine and serine/threonine kinase	979	1241	IPR001245	GO:0004672\|GO:0006468

Showing 1 to 10 of 29 entries

Previous1 2 3Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac5g00666	Phac-Chr5	5985492	5994334	Dispersed/Tandem

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac5g00666	34	618	MAP Kinase Kinase Kinase	AT1G16270	38.522	4.33e-97	335

Showing 1 to 1 of 1 entries

Transcription factors information

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-6	Phac5g00666		PK_Tyr_Ser-Thr	1.2e-61	CL0016

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac5g00666	-		-	var:108333936	2273.05

Showing 1 to 1 of 1 entries