Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00659 ATGGATAAATCAGAGGTGACTCCACAGCGGCAGCAGCAACAAGAGCAGCAGCATGTGATGGGAGTTGCTGCAAATGCTAGCCAAATGGCCTATTCTCACTACCAGACTGCTCCCATGGTGGCTGCTGGCACACCTGCTGTAGCTGTGCCTTCTCCAACACAAGCTCCTGCTGCCTTCTCTAGTTCTGCTCACCAACTTGCTTACCAGCAAGCACAGCATTTTCACCATCAACAACAGCAGCACCAACAACAGCAGCTGCAAATGTTCTGGTCAGATCAAATGCAAGAAATTGAGCAAACAATTGACTTTAAAAACCACAGTCTCCCTCTTGCTCGAATAAAAAAGATAATGAAAGCTGATGAAGATGTCCGAATGATTTCAGCAGAAGCTCCAGTCATATTTGCAAAAGCATGTGAAATGTTCATATTAGAGTTGACATTACGTTCTTGGATTCACACAGAAGAGAACAAGAGGAGGACCTTACAAAAGAATGATATAGCAGCTGCTATTTCAAGAAATGATGTTTTTGATTTCTTGGTTGATATTATTCCAAGAGATGAATTGAAAGAGGAAGGACTTGGAATAACCAAGGCTACTATTCCATTAGTGGGTTCACCCGCTGATATTCCCTATTACTATGTCCCTCCACAGCATCCTGTGGGACCTCCTGGGATGATCATGGGGAAGCCAGTTGATCAAGCAGCGCTATATTCTACACAGCAGCCTCGACCTCCCATGGCTTTCATGCCATGGCCCCATACACAACCCCAGCCACAGCATTCACCCCAACAACAAACAGATTCCTGA 807 0.4523 MDKSEVTPQRQQQQEQQHVMGVAANASQMAYSHYQTAPMVAAGTPAVAVPSPTQAPAAFSSSAHQLAYQQAQHFHHQQQQHQQQQLQMFWSDQMQEIEQTIDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRNDVFDFLVDIIPRDELKEEGLGITKATIPLVGSPADIPYYYVPPQHPVGPPGMIMGKPVDQAALYSTQQPRPPMAFMPWPHTQPQPQHSPQQQTDS* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00659 268 MobiDBLite consensus disorder prediction 242 268 - -
Phac5g00659 268 MobiDBLite consensus disorder prediction 1 20 - -
Phac5g00659 268 FunFam Nuclear transcription factor Y subunit gamma 72 185 - -
Phac5g00659 268 Gene3D Histone, subunit A 68 185 IPR009072 GO:0046982
Phac5g00659 268 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 62 249 - -
Phac5g00659 268 SUPERFAMILY Histone-fold 64 179 IPR009072 GO:0046982
Phac5g00659 268 Pfam Core histone H2A/H2B/H3/H4 72 170 IPR007125 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00659 Phac-Chr5 5953271 5955915 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00659 86 214 CCAAT-HAP5 Transcription Factor Family AT1G56170 88.462 8.71e-81 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Phac5g00659 CBFD_NFYB_HMF 2.3e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00659 K08066 - gmx:100796987 411.379