Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00656 ATGCCCCTCTCTCCCTCTTCCATGGCCTCAATCCCACAGTTCTATCCAAACTACACGTTCACTACTCACGATCTTTCCGAGTTCCCTACCCCACTCATCAGTGGCAACGCCTCAGTTATGGAGAATACCATGTGGGGTGGTCAAGATAGCTTGATTCCCGTGCTTGATATCAATAATGGTGCACTTGATCATATCGTGTCACTGGATTGTGATACCATGGCTTGTGCCAATTGGATGCCGTCCTTTTCTGACCAAGTTGGGGGGCTTTCGAACTTGGCCATTTCAGACTGCAAAATGGGCTTTTATGGAGGGTTTCAGAACTTCAACGGCAGATACCAGCCACATATTGGGGAGTTTGGAGAAGAATGTTGTGGGTTTGTGGAGGATGTTAAGCCTCCTGCATATCCTAATGCTGCAAGAGAAAACTGGGGACTTCAAGGTAATCAAATGCAAGCAGTTGAAGAGCCTAACATAAAGGTAGGAAGGTACTCAGAAGAAGAGAGGAAAGAAAGAATTCTCCGATATTTGAAGAAAAGAAATCAAAGAAACTTTAACAAAACCATCAAGTACGCATGTCGGAAAACCTTAGCTGATAGGCGAGTGAGAGTTAGGGGAAGGTTTGCAAGAAACAATGAGCTTTGTGATGAAGACATGACATCAAAAAAACATGAGAATCATCATCACCACAAAGAAGACTTCTACGGTGGTGATTCAATCCAGTTCCAGTTAAAGAATGATGAGGAGGATTGGCTGCAAGAGGCTATGGCAAGTCTAGTTTATTTATCTCATTCTTCACCAGAAGATATGTAA 810 0.4346 MPLSPSSMASIPQFYPNYTFTTHDLSEFPTPLISGNASVMENTMWGGQDSLIPVLDINNGALDHIVSLDCDTMACANWMPSFSDQVGGLSNLAISDCKMGFYGGFQNFNGRYQPHIGEFGEECCGFVEDVKPPAYPNAARENWGLQGNQMQAVEEPNIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELCDEDMTSKKHENHHHHKEDFYGGDSIQFQLKNDEEDWLQEAMASLVYLSHSSPEDM* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00656 269 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 142 224 IPR045281 GO:0009909
Phac5g00656 269 ProSiteProfiles CCT domain profile. 168 210 IPR010402 GO:0005515
Phac5g00656 269 Pfam CCT motif 168 210 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00656 Phac-Chr5 5873594 5875627 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00656 164 218 C2C2-CO-like Transcription Factor Family AT5G57660 47.273 1.70e-10 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac5g00656 CCT 8.3e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00656 - - vra:106761508 507.679