Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00655 ATGAAAGAGAGTGGTAGAAAACAAGGTACCATGTCGCCATGTGCGGCCTGCAAGCTTCTTCGAAGGAGGTGCACGAGGGATTGTGTGTTTGCTCCTTATTTCCCTGCTGATGAACCCCAGAAGTTTGGCAGTGTGCACAAGGTTTTCGGGGCTAGCAATGTGAACAAAATGCTACAGGAATTACCTGAGCACCAAAGAAGTGATGCAGTGAGTTCAATGGTATATGAAGCGAATGCAAGGGTGAGGGACCCTGTGTATGGATGTGTGGGAGCCATTTCCTCTCTGCAACAACAAGTTGATGTGCTCCAAACCCAATTGGCGCAGGCACAAGCAGAGGTTGTTCACATGAGAATGCGGCAATTGTCACCACCACCATCAGATCAACACCACCACCAAGCCTCCCTGATGGCACCTGAGCCCTCCAATTCATCATCAGAAAACTTGTTCCAATCTAGCAGGGTATTGTCTGCACAAACCAAGTCCCTTTTTGGCATGGACATGGTGGTTGACCAGGCTATGATGGGGCAATCCTTGTGGTCATACTAG 546 0.4908 MKESGRKQGTMSPCAACKLLRRRCTRDCVFAPYFPADEPQKFGSVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDVLQTQLAQAQAEVVHMRMRQLSPPPSDQHHHQASLMAPEPSNSSSENLFQSSRVLSAQTKSLFGMDMVVDQAMMGQSLWSY* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00655 181 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Phac5g00655 181 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 143 - -
Phac5g00655 181 MobiDBLite consensus disorder prediction 125 150 - -
Phac5g00655 181 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Phac5g00655 181 Coils Coil 92 119 - -
Phac5g00655 181 MobiDBLite consensus disorder prediction 121 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00655 Phac-Chr5 5814859 5819347 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00655 1 180 AS2 family AT1G31320 65.556 1.43e-71 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac5g00655 LOB 4.2e-43 No_clan