Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00641 ATGGCAGCACAGAACCTTTGCTTCATGGCAATGCGATCGTCAAAGCTTCTCTCTCGCCCTTCCTATCTTCTCTCTGTTCAGATGCAGATGCTATCCTCTTCTCTTCCCCTCACCCGGAAGATGAGCATGGATGCACAAAGTGTTGCTTCCAAGCTTACAAGTTCTGGACTGCTGAGGACTCAGGGCCTTATTGGAGGGAAATGGACTGACGCTTATGATGGAAAAACCATAAAGGTTTATAATCCAGCAACTGGTGAATCTATTGTAGATGTTGCGTGCATGGGTGGAAGAGAGACAAATGATGCAATTTCTGCAGCCTATGAAGCATATCGATCATGGAGCAAAACCACTGCTGCTGAAAGAAGCAAATTTTTGAGGAAATGGTATGATTTGCTAATGGTACATAAAGAAGAACTTGCACAACTTATAACCTTGGAGCAGGGGAAAACTCTTAAAGAGTCTATTGGTGAGATAAACTACGGGGCTGGCTTTGTTGAGTTTTCAGCTGAGGAGGCAAAACGTGTATATGGGGATATAATTCCTGCACCTTTATCTGATCGGCGACTATTTGTTCTTAAGCAGCCTGTAGGGGTTGTAGGTGCAATTACACCTTGGAACTTTCCCTTGGCTATGATTACTCGAAAGGTTGGTCCTGCCCTTGCATGTGGCTGTACAGTGGTCATAAAACCCTCTGAACTTACCCCTCTCACTGCTTTAGCTGCTGCAGAACTCTCCATTCAAGCCGGAATACCAGCGGGTGTCGTGAATGTTGTAATGGGAAATGCTCCTGATATTGGGGACGCTTTACTTGCAAGTTCACAGGTAAGGAAGATCACATTCACAGGCTCAACGGCTGTTGGAAAGAAATTAATGGCTGGATCAGCTGAGACAGTAAAAAGAGTATCTTTGGAACTTGGTGGCAACGCGCCTTGCATTATTTTTGATGATGCTGACCTTGATGTTGCAGTAAAAGGAACTCTTGCAGCAAAGTTCCGTAATAGTGGACAAACATGCGTTTGTGCAAATAGAATTATTGTACAAGAAGGTATATATGAGAAATTTGCAAATGCACTTTGTGATACTGTTCAGAGTATGAAAGTTGGGGATGGTTTTAGTGAAGGTGTGACACAGGGTCCTCTAATCAATGAAGCTGCTGTGGAAAAGGTTGAGTCCTTAATTCATGATGCTACATCAAAGGGGGCAAAAGTAATTACTGGGGGTAAAAGACATAGCCTTGGATTTACTTTTTATGAACCAACGGTGATCTGTGATGTCAACAATGAGATGCGCATATCCAGAGAAGAAGCATTTGGACCTGTTGCACCCCTTTTGAGATTCAAAACTGAAGAGGATGCTATCAGAATTGCTAACGACACCAACGCAGGTTTGGGTTCATACGTCTTTACAAACAGTATCCAACGATCATGGCGTGTTGCTGAAGCTCTAGAATATGGACTTGTAGGTGTTAATGAAGGAGTATTTTCAACTGAGGTGGCTCCTTTCGGTGGTTTTAAACAGTCGGGGCTTGGAAGAGAAGGCTCCAAATATGGAATGGATGAATATTTAGAGATAAAATATGTCTGCTTGGGAAACATGAACAAAGAATGA 1608 0.4303 MAAQNLCFMAMRSSKLLSRPSYLLSVQMQMLSSSLPLTRKMSMDAQSVASKLTSSGLLRTQGLIGGKWTDAYDGKTIKVYNPATGESIVDVACMGGRETNDAISAAYEAYRSWSKTTAAERSKFLRKWYDLLMVHKEELAQLITLEQGKTLKESIGEINYGAGFVEFSAEEAKRVYGDIIPAPLSDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELSIQAGIPAGVVNVVMGNAPDIGDALLASSQVRKITFTGSTAVGKKLMAGSAETVKRVSLELGGNAPCIIFDDADLDVAVKGTLAAKFRNSGQTCVCANRIIVQEGIYEKFANALCDTVQSMKVGDGFSEGVTQGPLINEAAVEKVESLIHDATSKGAKVITGGKRHSLGFTFYEPTVICDVNNEMRISREEAFGPVAPLLRFKTEEDAIRIANDTNAGLGSYVFTNSIQRSWRVAEALEYGLVGVNEGVFSTEVAPFGGFKQSGLGREGSKYGMDEYLEIKYVCLGNMNKE* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00641 535 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 303 310 IPR029510 GO:0016491
Phac5g00641 535 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 331 342 IPR016160 GO:0016491
Phac5g00641 535 Pfam Aldehyde dehydrogenase family 68 527 IPR015590 GO:0016491
Phac5g00641 535 NCBIfam succinate-semialdehyde dehydrogenase 79 525 IPR010102 GO:0009013|GO:0009450
Phac5g00641 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 307 496 IPR016163 GO:0016620
Phac5g00641 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 74 521 IPR016162 GO:0016491
Phac5g00641 535 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 53 532 - -
Phac5g00641 535 FunFam Succinate-semialdehyde dehydrogenase I 74 317 - -
Phac5g00641 535 CDD ALDH_F5_SSADH_GabD 79 529 - -
Phac5g00641 535 SUPERFAMILY ALDH-like 54 533 IPR016161 GO:0016491
Phac5g00641 535 FunFam Succinate-semialdehyde dehydrogenase I 307 496 - -
Phac5g00641 535 FunFam Aldehyde dehydrogenase, putative 499 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00641 Phac-Chr5 5596226 5622295 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00641 15 535 Aldehyde Dehydrogenase Gene Family AT1G79440 77.735 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00641 K17761 - gmx:100808318 966.066