Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00636 ATGGAGAGAATGTTCCCTCCCAAGAAGCCCTCAACTATGAATTCTCATGACAGACCCATGTGTGTGCAAGGAGACTCGGGTCTTGTCCTCACCACTGACCCAAAACCTCGCCTCCGTTGGACTGTTGAACTCCATGAACGCTTTGTTGATGCTGTTACTCAGCTTGGAGGCCCTGATAAGGCTACTCCCAAAACCATCATGAGGGTTATGGGTGTGAAGGGTCTCACCCTTTACCACCTCAAGAGCCACCTTCAGAAGTTTAGGCTTGGCAAGCAGCCCCACAAGGAATTCAATGATCACTCGATTAAGGATGGTATGAGAGCTTCCGCTTTAGAACTGCAACGAAATACTGCTTCCTCCTCAGCCATGATTGGCCGCAACATGAATGAGATGCAAATAGAGGTGCAGAGAAGATTGCACGAACAACTTGAGGTTCAAAAACACCTTCAGCTGAGGATTGAGGCTCAAGGGAAATACATGCAGAGCATATTGGAGAAGGCTTATCAAACACTTGCTGGTGAAAACATGGCATCTGCGGCCACTAACTTAAAGGGTGGTATTGTACCTCATCAAATTCCTGACATGGGGGTGTTGAAGGAGTTTGGTTCCCCTCTCGGTTTTTCTTCTTTTCAAGATCTTGAGAATATTTATGGTGGTGACCAAATTGACCTTCAGCACAACATGGAGAAGCCACCCGTTGATCATGGATTTATGTCAATCAATGATAGTTTGTGTCTGGGGAAGAAGAGATCCAACCCTTACAGTGGGAGTGGGAAGAGCCCTTTGATTTGGAGTGATGATCTCAGGCTCCAAGATCTGGGAGGGCCAGCCTCATCTTGCCTTGGTCCTCAAGATGACCCTTTCAAAGGCGACCATATTCAGATTACACCACAAGGATCATTGGATAGAGGCAGCACTGACATTGATCCCATGTCAGATATCTATGACTCAAAGCCTGTGCTTCAGGGTGAAGCTGTAGTGGGGGAAAAAAAGTTTGATACATCTATGAAGCTTGAAAGGCCATCACCAAGAAGAGCTCCTCTTCAGGCGGAAAGGATGAGTCCTATGATCAGTACTGGTACAATGGCACAAGGTAGAGGCTCACCATTTGGGTGA 1116 0.4695 MERMFPPKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDGMRASALELQRNTASSSAMIGRNMNEMQIEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMASAATNLKGGIVPHQIPDMGVLKEFGSPLGFSSFQDLENIYGGDQIDLQHNMEKPPVDHGFMSINDSLCLGKKRSNPYSGSGKSPLIWSDDLRLQDLGGPASSCLGPQDDPFKGDHIQITPQGSLDRGSTDIDPMSDIYDSKPVLQGEAVVGEKKFDTSMKLERPSPRRAPLQAERMSPMISTGTMAQGRGSPFG* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00636 371 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Phac5g00636 371 MobiDBLite consensus disorder prediction 1 20 - -
Phac5g00636 371 Gene3D - 34 92 - -
Phac5g00636 371 FunFam Myb family transcription factor 34 92 - -
Phac5g00636 371 MobiDBLite consensus disorder prediction 333 371 - -
Phac5g00636 371 NCBIfam myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Phac5g00636 371 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Phac5g00636 371 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
Phac5g00636 371 Pfam MYB-CC type transfactor, LHEQLE motif 131 170 IPR025756 -
Phac5g00636 371 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 183 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00636 Phac-Chr5 5541093 5544147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00636 4 371 G2-like Transcription Factor Family AT1G79430 58.639 4.06e-127 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac5g00636 Myb_DNA-binding 2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00636 - - gmx:100807793 691.804