Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00634 ATGAGCTGTTGCAAAAACCCAAGTGCTCAATGTCCTCTGCAGAGAGTGTTTCCACAGAACTTAGTGATGGGCCACCGTTGCTGCAGCAAACAGAGGATCAAAAGAGGACTTTGGTCTCCTGAAGAAGATGAAAAACTTGTCAGATATATCAACATACATGGACATAAAAGTTGGAGTTCTGTGCCAAAATATGCAGGATTGCAGAGATGTGGCAAGAGTTGCAGGTTGAGATGGATTAATTATCTTAGGCCGGATCTGAAGAGGGGTTCCTTCACTGCTGAAGAAGAGCAGATCATAATTGATATTCATAGAATTCTTGGAAACAGATGGGCACAAATAGCTAAACACCTACCAGGAAGAACAGACAACGAGGTCAAAAATTTCTGGAACTCATGCATAAAGAAGAAGCTCATTTCTCAAGGGTTAGATCCACAAACCCACAATCTCCTATCTTCTCATAGAAGAAGCTCAGCATCTACCATCTCCAATATGCATCAAAATTCCAATTCCATTTTCATTATGAGTTCACACACACCAAATGCACCAGTGAAAACTACTTTTCAAACCTTTTCTTCATTACCTAAACCTCCACCAAACATCGTTCAAACTCCCTCCAGCTTTGTTACATCTGAATATCAAACAGCGCCTATTATTTCAAATAAATTTTCATCCGATTTGCCTTGTGAACTATTAATCGACAACGCCTCCAACATTTGTTCACCTTCATATATGAACCCCACTGCAGTAGAATTGTCGAACAATGAAAGCGTTGCTAATTGGGTTTCAAGAGTTAATGTTGATGATTTCAGCGCTCAAACACTTGAAGAGCGAACACAAGTGCTGGTGCAGCAAGAGAAGGACAAGATTTGTGAGGATACGGGAACTGATGTGAGAGAAGCTAACAAGGGCTATCTTGAAAGCAGTGCTTCTTTCGAGAGTTCTAACTTTGATTTTGGCTTGTTGGAGAGTGTACTTTCCTCCGAATTTATCTCTCATGATCTCAGTTGTATGGATGAACTTGCATGGAACTTTTAG 1035 0.4048 MSCCKNPSAQCPLQRVFPQNLVMGHRCCSKQRIKRGLWSPEEDEKLVRYINIHGHKSWSSVPKYAGLQRCGKSCRLRWINYLRPDLKRGSFTAEEEQIIIDIHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLISQGLDPQTHNLLSSHRRSSASTISNMHQNSNSIFIMSSHTPNAPVKTTFQTFSSLPKPPPNIVQTPSSFVTSEYQTAPIISNKFSSDLPCELLIDNASNICSPSYMNPTAVELSNNESVANWVSRVNVDDFSAQTLEERTQVLVQQEKDKICEDTGTDVREANKGYLESSASFESSNFDFGLLESVLSSEFISHDLSCMDELAWNF* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00634 344 ProSiteProfiles Myb-like domain profile. 83 133 IPR001005 -
Phac5g00634 344 Gene3D - 32 88 - -
Phac5g00634 344 SUPERFAMILY Homeodomain-like 32 129 IPR009057 -
Phac5g00634 344 CDD SANT 38 82 IPR001005 -
Phac5g00634 344 PANTHER MYB DOMAIN PROTEIN 55 23 312 - -
Phac5g00634 344 FunFam MYB transcription factor 27 88 - -
Phac5g00634 344 ProSiteProfiles Myb-like domain profile. 30 82 IPR001005 -
Phac5g00634 344 CDD SANT 90 130 IPR001005 -
Phac5g00634 344 FunFam Transcription factor MYB86 89 163 - -
Phac5g00634 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 137 IPR017930 -
Phac5g00634 344 Gene3D - 89 165 - -
Phac5g00634 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 82 IPR017930 -
Phac5g00634 344 SMART sant 34 84 IPR001005 -
Phac5g00634 344 SMART sant 87 135 IPR001005 -
Phac5g00634 344 Pfam Myb-like DNA-binding domain 35 82 IPR001005 -
Phac5g00634 344 Pfam Myb-like DNA-binding domain 88 131 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00634 Phac-Chr5 5468176 5470130 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00634 23 344 MYB Transcription Factor Family AT3G12720 48.000 2.33e-88 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac5g00634 Myb_DNA-binding 1.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00634 K09422 - gmx:100791209 534.643