Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00610 ATGGGAACGCCTGTGAACATCATCGTTGGATCACAGGTTTGGGTTGAGGATCCGGAGGTTGCATGGATTGATGGTGAGGTCACAGAAATCAATGGCAAAAATGTAACCATCATTGCCACAAATGGGAAAACTATGGTGGCAGAAATTTCAAGCATATACCCCAAAGATACAGAAGCACCACCTGCAGGAGTTGATGACATGACCAAGCTAGCTTACCTTCATGAGCCAGGAGTCCTGCATAACCTTGCAACTCGTTTTTCTCTCAATGAGATATATACATATACAGGGAATATCTTAATTGCAGTGAATCCTTTTCGAAGATTGCCACACTTGTATGACATCCATATGATGGAGCAGTACAAAGGAGCAGCATTTGGAGAGCTTAGTCCTCACCTTTTTGCTGTAGCTGACACATGTTACAGGGCAATGATAAATGAAAATGGAAGTCAATCCATTTTGGTAAGTGGAGAGAGTGGAGCTGGTAAAACTGAGACAACAAAAATGCTCATGAGGTACCTAGCATTCATGGGGGGTAGAGCTGCTACAGAAGGAAGAACTGTAGAGCAACAGGTTTTGGAGGTGATCCAATCCAGTGCTGGAAGCATTTGGAAATGCCAAAACGGTCAAAAACAACAATTCAAGGATGCCAACAAGTACAAGTTAGGGGATCCAAGGCAATTCCACTATCTTAATCAATCAAACTGTTATGAAGTGTCAAATGTAGATGATGCAAAAGAATACTTGGAGACCAGAAATGCAATGGACATTGTAGGCATTAACCAAGAAGAGCAGGATGCTATCTTCCGTGTGGTAGCTGCGATCCTCCATCTTGGAAACATTGACTTCGTCAAAGGGAAAGAAGTGGATTCTTCCAAATTGAAAGATGATAAATCACTCTTCCACCTCCAAACAGCTGCAGAGTTGTTCATGTGTGATGCAAAAGCACTAGAAGATTCACTTTGCAAGCGTGTCATTGTAACTCCTGATGGTAACATCACCAAACCTCTGGACCCTGATGCAGCTGCTTTGAGTCGAGATGCCTTGTCAAAGACTGTGTACTCCAAATTGTTTGATTGGATTGTGGACAAAATTAACAGTTCAATTGGTCAAGATTCCAATGCAGTAAGCATAATTGGAGTCCTTGACATTTATGGATTTGAAAGCTTCAAAATCAACAGTTTTGAGCAACTATGCATCAACCTAACGAATGAGAAGTTGCAACAACATTTTAATCAGCATGTATTCAAGATGGAGCAAGAAGAGTACACAAAGGAGGAAATTGATTGGAGCTATGTAGAGTTTGTGGATAACCAGGATGTTCTTGATCTTCTTGAGAAGAAACCAGGGGGAATAATCGCTCTTCTAGATGAAGCCTGCATGTTCCCAAAATCAACTCATGAGACTTTTGCACAAAAAATGTACCAGACATATAAATCCCACAAGCGCTTCAGCAAGCCAAAACTTGCTCGAACAGATTTCACAATTAACCATTATGCTGGAGATGTCACATATCAAGCAGATCATTTTCTTGATAAAAACAAAGATTATGTTGTAGCAGAGCATCAAGCTCTTTTATGTGCTTCCAAGTGCCCATTTGTTGCTAATCTTTTCCCTCCTTTACCAGAGGAGACATCAAAGCAATCCAAATTCTCTTCCATTGGTTCACAGTTCAAGCAACAACTGCAATCTCTCATGGAGACACTGAATACAACAGAACCCCATTACATACGATGTGTGAAACCAAATACAGTTTTGCAGCCTGGGATCTTTGAGAACTTTAACGTCTTGAACCAATTAAGATGTGGGGGAGTACTTGAAGCAATAAGGATTAGTTGTGCTGGATATCCAACAAAAAGAACTTTTGAAGAGTTCCTTGATCGTTTTGGAATGCTAGCACCCGATGTCCTTGATGGTTCTGATGAGAAAAAGGCCTCTATGGCCATCTGTGATAAGATGGGCTTAAAAGGCTATCAAATGGGAAAAACAAAGGTATTTCTCAGAGCAGGTCAGATGGCTGAAATTGATGCACGAAGAGCCGAAGTCTTAGCTAAAGCAGCTAAACTCATACAGAGACAAATCCGAACACATTTAACCAGAAAGGAGTTCATCACCCTAAGAAAGGCCACAATTCATATCCAGAAGATTTGGAGAGCTAAACTTGCACGTGAACTCTATGAGAATATGAGGAGGGAAGCAGCTTCTATCCGGATACAGAAACATGTGCGTGCACACAGAGCAAGAATGTATTATACATCATTACAAGAATCAGCTATAGTTCTTCAATCAGGCTTGAGAGCATTTGCAGCACGGAATGAATACAGGTACAGAAGAAGAACAAAGGCTTCAACAAAAATTCAGACACAATGGAGAAAAGTCCAAGCTCTTTCTGATTACAAACAGCAGAAGAGAGCAACTGTTTCACTTCAATGTCTTTGGAGAGCCAGAATTGCAAGGAAAGAGCTCCGAAAGCTTCGGATGGCTGCAAGAGAAACTGGTGCACTTAAGGAAGCAAAGGACAAGTTGGAGAAGCGTGTTGAGGAGCTTACATGGAGACTAGATATTGAAAAGCACATGAGGATGGATCTTGAAGAAGCTAAAGGGCAAGAGATTGCAAAATTGCAAAATTCATTACAAGAAATGCAAGCTCAGCTAGATGAATCCCAGGCAGCAATTATACATGAGAGAGAAGCAGCAAAAATAGCAATTGAACAAGCACCACCAGTTATTAAAGAGGTACCTGTTGTGGACGATACAAAGCTAGAGTTACTGACAAATAAAAATGAGGAGCTGGAGACTGAAGTAGAAGAGCTTAATAAGAAGATTAAAGAGTTTGAAGAGAAGTTCTCAGAAATTGAAAACGAGAATCAATCAAGAGTGAAAGAGGCGGAAGAAGCACAGCTTAAAGCAACACAACTTCAGGAGACTATTGAAAGATTAGAATTGAGTTTGTCAAACCTCGAGTCTGAGAACCAGGTTCTATGCCAGAAGGCTTTGGAAGAATCAAAAAATGAAGAACTCTTTGAAGAGATCAAAATTCTCAAGGGTCAGATAGCAAATCTAGAATCAGAGAATGAATTCCTACGGAGCCAGGCAGCAGCAGCTGCTTTAGAGCATAAAGTCCATCCAGAGAAAATAGAACCAGACCATTCAGCAGCTGCTTTAGAGCAGAAAGTTCATCCAGAAAAAATGGAACCAGACCATGAAGTTGCTGTTGTGGAGAAGATAAAAGTCCAACCAAGAGTTATTGCAGATAATATGACTTCCCAAATCAAGACTTTGGATAATGGAAATCAGACAGAGGAAGAATGGCATGCAAGAAAAGAACCAAAAGCACAAGTCTTCTTGCTTACTAAACAAAGATCACTCACAGATAGACAACAGGAAAGTCATGATGCACTGCTGAAGTGTCTCGCTGAAGATAAGAGATTTGAGAAAAACAGACCAGCAGTTGCTTGTATTGTATATAAAGCACTTCTTCATTGGAGATCCCTTGAAGCAGAAAAAACACATATTTTTGATAAAATTACACACACTATACGATCATCTATAGAGAGTCAAGAAGGAATCCATGATCTGGCCTACTGGCTTTCAACTACTTCAACACTTCTGTTTTATCTGCAATGCACAATGAAGGCCAGCAATACAACTAAGGCAGTGTCACGTAATCGAAACTCCCCTGCCACTTTGTTTGGAAAAATGGCACAAGGATTGCGTTCATCTTCAATGGGCTTGGGGATTTCAAGTGGCTACAGTGGAATGGTGGAGAAGCCAAATGATCAGTCTAAAGTAGAAGCCAAATATCCAGCTATTCTGTTTAAGCAGCATTTAACTGCATATGTCGAGAAGATATATGGAATGATCCGTGATAGTCTAAAGAAAGAGATTAGCCCATTCTTAAATTTGTGTATTCAGGCACCAAGATCCATAAGGACTAGATCAATAAGAGGATCATCCAGAAACATCCATTCAAATATTGTTGCAAAACAGCAAGCATTACATATGTACTGGAAAGGCATTGTGGACAAGTTAGATAATACCTTGCGTATATTGTCTGATAACTATGTCCCTCCCATCCTTGCAAGAAAGATATTTAGTCAAGTTTTCTCATTCATGAATATCCAGCTATTTAATAGTTTGTTGCTTCGTCGTGAGTGTTGTTCCTTTAGCAATGGAGAATATTTGAAGGCAGGATTGCATGAGTTGGAACTATGGTGTCTTAAAGCAACAGACCAGTTTGCTGGTTCATCTTGGGATGAACTCAAACATATACGCCAAGCTGTGGGATTTCTGGTTTTGCATCAAAAGACTCAAAAATCTTTGGAGGAAATCACAAATGAGCTCTGCCCGGTGTTAAGTATTCCACAAATATATCGTATTGGAACTATGTTCTGGGATGACAAGTATGGAGCACAGGGATTATCTCCAGAAGTCATTACCAGAATGAGAGTGATTATGACAGAAGACTCAATAAGCATACATAATAGCTCATTCCTTCTAGAGGTGGATTCCAGCATACCATTCTTGATGGAAGAGATGTTTCGGTCCATGAGTGACATCCGCCTATCAGACATGGATGTGGATCCACCACCAATACTCAGGCAAAGGTCTGACTTCCAATTCTTGTTGCAACAAATGGACAGTGACTCTCAGTGA 4653 0.4043 MGTPVNIIVGSQVWVEDPEVAWIDGEVTEINGKNVTIIATNGKTMVAEISSIYPKDTEAPPAGVDDMTKLAYLHEPGVLHNLATRFSLNEIYTYTGNILIAVNPFRRLPHLYDIHMMEQYKGAAFGELSPHLFAVADTCYRAMINENGSQSILVSGESGAGKTETTKMLMRYLAFMGGRAATEGRTVEQQVLEVIQSSAGSIWKCQNGQKQQFKDANKYKLGDPRQFHYLNQSNCYEVSNVDDAKEYLETRNAMDIVGINQEEQDAIFRVVAAILHLGNIDFVKGKEVDSSKLKDDKSLFHLQTAAELFMCDAKALEDSLCKRVIVTPDGNITKPLDPDAAALSRDALSKTVYSKLFDWIVDKINSSIGQDSNAVSIIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYVEFVDNQDVLDLLEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKSHKRFSKPKLARTDFTINHYAGDVTYQADHFLDKNKDYVVAEHQALLCASKCPFVANLFPPLPEETSKQSKFSSIGSQFKQQLQSLMETLNTTEPHYIRCVKPNTVLQPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFEEFLDRFGMLAPDVLDGSDEKKASMAICDKMGLKGYQMGKTKVFLRAGQMAEIDARRAEVLAKAAKLIQRQIRTHLTRKEFITLRKATIHIQKIWRAKLARELYENMRREAASIRIQKHVRAHRARMYYTSLQESAIVLQSGLRAFAARNEYRYRRRTKASTKIQTQWRKVQALSDYKQQKRATVSLQCLWRARIARKELRKLRMAARETGALKEAKDKLEKRVEELTWRLDIEKHMRMDLEEAKGQEIAKLQNSLQEMQAQLDESQAAIIHEREAAKIAIEQAPPVIKEVPVVDDTKLELLTNKNEELETEVEELNKKIKEFEEKFSEIENENQSRVKEAEEAQLKATQLQETIERLELSLSNLESENQVLCQKALEESKNEELFEEIKILKGQIANLESENEFLRSQAAAAALEHKVHPEKIEPDHSAAALEQKVHPEKMEPDHEVAVVEKIKVQPRVIADNMTSQIKTLDNGNQTEEEWHARKEPKAQVFLLTKQRSLTDRQQESHDALLKCLAEDKRFEKNRPAVACIVYKALLHWRSLEAEKTHIFDKITHTIRSSIESQEGIHDLAYWLSTTSTLLFYLQCTMKASNTTKAVSRNRNSPATLFGKMAQGLRSSSMGLGISSGYSGMVEKPNDQSKVEAKYPAILFKQHLTAYVEKIYGMIRDSLKKEISPFLNLCIQAPRSIRTRSIRGSSRNIHSNIVAKQQALHMYWKGIVDKLDNTLRILSDNYVPPILARKIFSQVFSFMNIQLFNSLLLRRECCSFSNGEYLKAGLHELELWCLKATDQFAGSSWDELKHIRQAVGFLVLHQKTQKSLEEITNELCPVLSIPQIYRIGTMFWDDKYGAQGLSPEVITRMRVIMTEDSISIHNSSFLLEVDSSIPFLMEEMFRSMSDIRLSDMDVDPPPILRQRSDFQFLLQQMDSDSQ* 1551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00610 1550 Gene3D - 680 732 - -
Phac5g00610 1550 Gene3D - 733 779 - -
Phac5g00610 1550 Gene3D - 780 829 - -
Phac5g00610 1550 Gene3D Myosin VI head, motor domain, U50 subdomain 260 549 - -
Phac5g00610 1550 ProSiteProfiles IQ motif profile. 778 807 IPR000048 GO:0005515
Phac5g00610 1550 ProSiteProfiles Dilute domain profile. 1173 1487 IPR002710 -
Phac5g00610 1550 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 733 IPR027417 -
Phac5g00610 1550 Coils Coil 863 897 - -
Phac5g00610 1550 FunFam unconventional myosin-Va 781 828 - -
Phac5g00610 1550 CDD MyosinXI_CBD 1124 1510 IPR037975 GO:0007015
Phac5g00610 1550 Gene3D Kinesin motor domain 12 197 IPR036961 -
Phac5g00610 1550 ProSiteProfiles IQ motif profile. 705 734 IPR000048 GO:0005515
Phac5g00610 1550 CDD MYSc_Myo11 76 667 IPR036018 -
Phac5g00610 1550 SMART MYSc_2a 56 680 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phac5g00610 1550 Pfam IQ calmodulin-binding motif 803 822 IPR000048 GO:0005515
Phac5g00610 1550 Pfam IQ calmodulin-binding motif 732 750 IPR000048 GO:0005515
Phac5g00610 1550 Pfam IQ calmodulin-binding motif 684 702 IPR000048 GO:0005515
Phac5g00610 1550 Pfam IQ calmodulin-binding motif 755 774 IPR000048 GO:0005515
Phac5g00610 1550 Pfam IQ calmodulin-binding motif 706 725 IPR000048 GO:0005515
Phac5g00610 1550 Pfam DIL domain 1363 1466 IPR002710 -
Phac5g00610 1550 FunFam unconventional myosin-Va 733 780 - -
Phac5g00610 1550 Coils Coil 718 738 - -
Phac5g00610 1550 ProSiteProfiles IQ motif profile. 730 756 IPR000048 GO:0005515
Phac5g00610 1550 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Phac5g00610 1550 Pfam Myosin N-terminal SH3-like domain 10 46 IPR004009 GO:0003774|GO:0005524|GO:0016459
Phac5g00610 1550 Gene3D - 387 571 - -
Phac5g00610 1550 FunFam unconventional myosin-Va 684 732 - -
Phac5g00610 1550 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 733 830 IPR027417 -
Phac5g00610 1550 SMART DIL_2 1362 1469 IPR002710 -
Phac5g00610 1550 Coils Coil 824 858 - -
Phac5g00610 1550 ProSiteProfiles IQ motif profile. 753 782 IPR000048 GO:0005515
Phac5g00610 1550 Coils Coil 920 1037 - -
Phac5g00610 1550 Gene3D Kinesin motor domain 371 610 IPR036961 -
Phac5g00610 1550 ProSiteProfiles IQ motif profile. 682 709 IPR000048 GO:0005515
Phac5g00610 1550 ProSiteProfiles Myosin motor domain profile. 62 679 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phac5g00610 1550 Pfam Myosin head (motor domain) 214 667 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phac5g00610 1550 Pfam Myosin head (motor domain) 64 193 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phac5g00610 1550 ProSiteProfiles IQ motif profile. 801 830 IPR000048 GO:0005515
Phac5g00610 1550 FunFam Myosin 2 260 377 - -
Phac5g00610 1550 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phac5g00610 1550 PRINTS Myosin heavy chain signature 377 405 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phac5g00610 1550 PRINTS Myosin heavy chain signature 430 458 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phac5g00610 1550 FunFam Class V myosin 387 526 - -
Phac5g00610 1550 SMART iq_5 729 751 IPR000048 GO:0005515
Phac5g00610 1550 SMART iq_5 681 703 IPR000048 GO:0005515
Phac5g00610 1550 SMART iq_5 777 799 IPR000048 GO:0005515
Phac5g00610 1550 SMART iq_5 752 774 IPR000048 GO:0005515
Phac5g00610 1550 SMART iq_5 704 726 IPR000048 GO:0005515
Phac5g00610 1550 SMART iq_5 800 822 IPR000048 GO:0005515
Phac5g00610 1550 Gene3D - 214 258 - -
Phac5g00610 1550 Gene3D - 615 677 - -
Phac5g00610 1550 PANTHER MYOSIN 210 1475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00610 Phac-Chr5 4909583 4923201 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00610 116 1545 Myosins gene family AT2G31900 67.318 0.0 2029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00610 K10357 - gmx:100817933 2735.29