Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00608 ATGATGCCAGGCAATGGACAGTTAACAGTTCCTCCTGGCTTCAGGTTCCACCCTACTGATGAGGAGCTTCTCTACTATTACCTGAGGAAGAAAGTTTCTTATGAAGCCATTGATCTTGATGTCATAAGAGAAGTGGATCTCAACAAACTTGAGCCTTGGGACCTCAAAGACAAATGTAGGATTGGGTCAGGGCCTCAGAATGAGTGGTATTTCTTCAGCCACAAGGATAAGAAATACCCGACAGGAACAAGAACAAATCGAGCAACTACAGCTGGTTTTTGGAAAGCAACTGGAAGGGACAAGGCCATATACCACACTAATTCCAAGAGGATTGGCATGAGGAAAACCCTAGTTTTCTACACTGGTCGTGCTCCTCATGGCCAGAAGACTGATTGGATCATGCACGAGTATCGCCTTGATGAAGATGATACTGATGTTCAGCAGGAAGATGGGTGGGTGGTATGCAGGGTTTTCAAAAAGAAAAACCAAAATCGAGGTTTCCAGCAAGAAATTGAAGAAGAAGAAAACTTAACCCACATGAGAACAAGTGGTCCTTGCCATGTTCTAGAGCCAAAACATCACATGCAAGGAGGACTATATGAGTACAACTTTGATGGCACAATGCACCTTCCACAGTTGTTCAGTCCAGAAACAGCTGTTGCACCAACCACTACTTCCTTGGCCACATCCATGAATGCCATGGACATCCTTGAGTGCTCTCAAAACTTGTTGAGGCTCACAACTACTGGCTGTGGACTGAATCTTATGCAACAACAAGGAGAGAGGTTCAGTGGTGACTGGTCATTCTTGGACAAGCTTCTAGCATCCCACCATGGCATGGATCATCACCATCATCCACAAAGCAAATGTAACCCTCCCACTCACCAAGCTGCAACTTCTGTTGCCACTTCAGCTCACAAATTCCCATTCCATTACCTTGGCGGTGACACCCATGATATCATGAAATTTTCCAAGTAG 978 0.4509 MMPGNGQLTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNKLEPWDLKDKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYHTNSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLDEDDTDVQQEDGWVVCRVFKKKNQNRGFQQEIEEEENLTHMRTSGPCHVLEPKHHMQGGLYEYNFDGTMHLPQLFSPETAVAPTTTSLATSMNAMDILECSQNLLRLTTTGCGLNLMQQQGERFSGDWSFLDKLLASHHGMDHHHHPQSKCNPPTHQAATSVATSAHKFPFHYLGGDTHDIMKFSK* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00608 325 ProSiteProfiles NAC domain profile. 10 160 IPR003441 GO:0003677|GO:0006355
Phac5g00608 325 Gene3D NAC domain 19 165 IPR036093 GO:0003677|GO:0006355
Phac5g00608 325 SUPERFAMILY NAC domain 5 160 IPR036093 GO:0003677|GO:0006355
Phac5g00608 325 FunFam NAC domain-containing protein 19 164 - -
Phac5g00608 325 Pfam No apical meristem (NAM) protein 11 139 IPR003441 GO:0003677|GO:0006355
Phac5g00608 325 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00608 Phac-Chr5 4875414 4878533 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00608 2 325 NAC Transcription Factor Family AT1G79580 53.316 8.40e-116 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac5g00608 NAM 2.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00608 - - vun:114178728 652.129