Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00596 ATGAGCTACAATGTGTCAGAAGAGGCACACCCTAGTGCTCATAGCAGTTGTGCAAATTCAGGAAAGAACTCACCAACTCATCCCAATAATGTGAACCAAGCAGAAAAAGAGACCTTTACAGCAAAAACTGTCCACAATTCAGGAAGTGAAACTGGACACTTAGACCATGTTTCAAAACCTGATAATGCAAAGTTGGAAGGTAAATCAAGGCCCCAGAGGCTAATCCCACCAAACAGGAATATTTCTGACTTCAACCAACACCAAAGTCCAAGGACAGCAAAGAAGCCTAGTTCAAACCCTGATCACCATCATTCAAAGACAATGTCTGTATCAACCCCACATGCAAAGACCCCTGGGAGTGGTGCTAGTTCTCGCAGTGACAGCTTAGAGAGCACAAGTGCACCCATTAGGCCACACACTGGGGGTGATGTGAGGTGGGAAGCTATCAACATGGTTTCAAGGTGTGGCCCTCTCAATCTCAGCCACTTCAGGCTTCTCAAGCGCATTGGTTATGGAGACATTGGAAGTGTGTACCTTGTGGATCTCAAAGGGACCAGGACCTACTTTGCCATGAAAGTAATGGACAAGGCAGCACTCATAAGCAGAAATAAGCTTCTGAGGGCACAGACAGAAAGGGAGATTCTTGGACTCCTTGACCACCCCTTTCTCCCAACTTTGTATTCTTACTTTGAAACTGACAAGTTTTACTGTCTGGTGATGGAGTTTTGTAGTGGAGGTGATCTTCATTCTCTTCGACAGAAGCAACCTAACAAGTGTTTCCCTGAAGAAGCTGCCAGGTTTTATGCTTCAGAGGTTTTGCTAGCTCTGGAGTACCTGCACATGCTGGGCATTGTATACAGAGACTTAAAACCAGAAAATCTTCTAGTGAGAGATGAAGGGCACATCATGCTATCAGATTTTGACTTATCCCTTCGCTGCTCCGTCAGTCCTACACTAGTTAAGTCTTCATCTGCTCATGCAAGCAACAATAGTGGTGGCAACAATGACTCCAGTGGCGTACTAAGTGATGACCAAGCAGTGTCAAGCACTACTCAAGCATCAAGTTTTTTTCCGCGCATTTTGCCTTCAAAGAAAAACCGCAAGGCAAAGTCAGATTTTGGCCTATTGGTTGGCGGAGCACGCCTGCCTGAACTGATGGCAGAACCCACCAACGTGAGATCAATGTCATTTGTAGGAACACATGAGTATCTTGCTCCTGAGATAATCAAAGGAGAGGGTCATGGTAGTGCAGTAGATTGGTGGACTTTTGGGATCTTCTTGTATGAGCTGTTGCATGGAGCAACCCCTTTCAAGGGTGCAGGGTATAAAGCCACACTTTTTAATGTTGTTGGACAACCACTTAGGTTCCCAGAAACTCCCCAGGTCAGTGCTGTGGCTCGTGACCTTATTAGGGGATTGCTGGTGAAAGAGCCTCAGAAAAGAATTGCATATAAAAGAGGAGCTACAGAGATAAAACAACACCCATTTTTTGAGGGAATGAACTGGGCTCTAGTTAGAAGTGCCACACCTCCTCACATACCAGATGCTATAGACTTCTCCAAGTATGCTAGCAAAGAGTCAGCACCCCCAGTGGACAAGAAGATGGCAGATATTGCTAATGATAAAAACAGCACTAATGCTAATGATTCTTACATAGATTTTGAGTATTTTTAG 1674 0.4486 MSYNVSEEAHPSAHSSCANSGKNSPTHPNNVNQAEKETFTAKTVHNSGSETGHLDHVSKPDNAKLEGKSRPQRLIPPNRNISDFNQHQSPRTAKKPSSNPDHHHSKTMSVSTPHAKTPGSGASSRSDSLESTSAPIRPHTGGDVRWEAINMVSRCGPLNLSHFRLLKRIGYGDIGSVYLVDLKGTRTYFAMKVMDKAALISRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGDLHSLRQKQPNKCFPEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLVRDEGHIMLSDFDLSLRCSVSPTLVKSSSAHASNNSGGNNDSSGVLSDDQAVSSTTQASSFFPRILPSKKNRKAKSDFGLLVGGARLPELMAEPTNVRSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLHGATPFKGAGYKATLFNVVGQPLRFPETPQVSAVARDLIRGLLVKEPQKRIAYKRGATEIKQHPFFEGMNWALVRSATPPHIPDAIDFSKYASKESAPPVDKKMADIANDKNSTNANDSYIDFEYF* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00596 557 MobiDBLite consensus disorder prediction 103 135 - -
Phac5g00596 557 SUPERFAMILY Protein kinase-like (PK-like) 160 521 IPR011009 -
Phac5g00596 557 PANTHER FLIPPASE KINASE 1-RELATED 23 523 - -
Phac5g00596 557 Gene3D Transferase(Phosphotransferase) domain 1 391 515 - -
Phac5g00596 557 Gene3D Transferase(Phosphotransferase) domain 1 247 317 - -
Phac5g00596 557 MobiDBLite consensus disorder prediction 323 344 - -
Phac5g00596 557 MobiDBLite consensus disorder prediction 1 51 - -
Phac5g00596 557 CDD STKc_phototropin_like 161 518 - -
Phac5g00596 557 Pfam Protein kinase domain 388 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g00596 557 Pfam Protein kinase domain 164 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g00596 557 ProSitePatterns Serine/Threonine protein kinases active-site signature. 284 296 IPR008271 GO:0004672|GO:0006468
Phac5g00596 557 MobiDBLite consensus disorder prediction 75 95 - -
Phac5g00596 557 ProSiteProfiles Protein kinase domain profile. 163 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g00596 557 SMART serkin_6 163 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g00596 557 MobiDBLite consensus disorder prediction 52 68 - -
Phac5g00596 557 Gene3D Phosphorylase Kinase; domain 1 161 246 - -
Phac5g00596 557 MobiDBLite consensus disorder prediction 1 140 - -
Phac5g00596 557 FunFam serine/threonine-protein kinase D6PK-like 247 314 - -
Phac5g00596 557 FunFam Serine/threonine-protein kinase D6PK-like 161 246 - -
Phac5g00596 557 FunFam Serine/threonine-protein kinase AGC1-7 390 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00596 Phac-Chr5 4711532 4713954 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00596 54 557 AGC Kinase Gene Family AT1G79250 66.284 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Phac5g00596 Pkinase 8.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00596 - - gmx:100784301 962.6