Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00583 ATGTATTCAATTGCAATGGAATCACCACACTACACAAAGGAGGATCTACACATCATGAAAAGTAAAAGCAAGAAGAAGAACAAACCAAGAGAAATTGGAATGGAAGGCAAAGGTTTAGGAGAAGTCAGAAGGCTTCACATCATTTACTTCCTTAGTCAGATAGGTGGTCGTGCAGATCATCCTCATCTAATTCGTGTTCTTCATCTTACTCGTAATGGGGTTTATCTAAGAGATGTGAAGAGATGGCTTGGGGAATTGAGAGGGAAAGAATTGCCTGAGGTTTTTTCTTGGTCCTACAAGAGGAGGTACAAGAGTGGATACGTGTGGCAAGACTTGTTGGATGACGACCTCATAACCCCCATCTCTGACAATGAATACATCCTCAAAGGATCACAAATCCACACTATCCCATTTGCAACAACTCCTTCACTTGAAGAAAAGAAAACTACAGTTTGTGATATCCATGCTGAAAAGATGTGTCCTCAATCACAACTTGTAGAGGACAAAGAACACCAGCAGCAGCCGCAACAGTCCTTAACAGAAGAAGAATCTCAGATTCAAGCAGACCATAATTCTAAAACAAATTCTCCAACAAAAGGGTCATCAGAAATCAGCCAGGATTCGTTGGTCTTCAGCTCAGACAGGTCGTCTGTGACAGATGATGACTCTTCTAAGGTTGAAGAAGAGAAGCACTTAGAGATCAAAACAGGCAAAGAGAGTTTCAATGAAATGCATCAGGAGAAATTAGAGACTTGCACATTGCCTTCCTTGTATCACAATTTATTGAGTAAGAAGGGCACCCACAAAGATGACCAAAATAAAACTCACTCACCTGATTCATCCTTGTCCACCATTTCGTCCTCATCGTCATCTCAATCATCCTTTACTAAGATCAGAAGCAATTCTACAAAAGTTTCTAACATATTTCGAAATTGGATCACTTGTGGCACTGCGGATACAAATGATGCAGCACTCATCCTGATGAACCAGGCTCAAAAAAAAAACTCGAAGGAACCTAACAACATACCAGAAACAAAACCTGAGATTTGTAAGGGAGACCGATTGGGAGGATCAGAGAGGTGTTTTAGGACTTCTTGGGGTCATCACGACCAGAAACAGCAATATGGGGCAAGAAAAAGCTTTGATGGAGAGGAAACAAACGGGAGCAGGAAAAAGTTAGGCGACTTGCTAAGTCAAACTTCTTCCAAACCATTTGGTGGACCAATTTGCTCGCAATGTGGGAAGTCGTTTAAGCCTGAGAAAATGTACAAACACATGAAGTCTTGTAAAGGAATGAAAGCGTTGGGAAAGTCAGCTCCAAATGTTGAGGAGGCACAGCTTCCGAGATCATCAACTTCATCCCATACACACTACTTTTTGACCAACTAA 1389 0.414 MYSIAMESPHYTKEDLHIMKSKSKKKNKPREIGMEGKGLGEVRRLHIIYFLSQIGGRADHPHLIRVLHLTRNGVYLRDVKRWLGELRGKELPEVFSWSYKRRYKSGYVWQDLLDDDLITPISDNEYILKGSQIHTIPFATTPSLEEKKTTVCDIHAEKMCPQSQLVEDKEHQQQPQQSLTEEESQIQADHNSKTNSPTKGSSEISQDSLVFSSDRSSVTDDDSSKVEEEKHLEIKTGKESFNEMHQEKLETCTLPSLYHNLLSKKGTHKDDQNKTHSPDSSLSTISSSSSSQSSFTKIRSNSTKVSNIFRNWITCGTADTNDAALILMNQAQKKNSKEPNNIPETKPEICKGDRLGGSERCFRTSWGHHDQKQQYGARKSFDGEETNGSRKKLGDLLSQTSSKPFGGPICSQCGKSFKPEKMYKHMKSCKGMKALGKSAPNVEEAQLPRSSTSSHTHYFLTN* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00583 462 MobiDBLite consensus disorder prediction 166 217 - -
Phac5g00583 462 MobiDBLite consensus disorder prediction 444 462 - -
Phac5g00583 462 MobiDBLite consensus disorder prediction 437 462 - -
Phac5g00583 462 MobiDBLite consensus disorder prediction 165 242 - -
Phac5g00583 462 MobiDBLite consensus disorder prediction 366 400 - -
Phac5g00583 462 MobiDBLite consensus disorder prediction 265 297 - -
Phac5g00583 462 MobiDBLite consensus disorder prediction 366 391 - -
Phac5g00583 462 MobiDBLite consensus disorder prediction 218 242 - -
Phac5g00583 462 Pfam Protein SOSEKI, plant 46 340 IPR010369 -
Phac5g00583 462 MobiDBLite consensus disorder prediction 277 297 - -
Phac5g00583 462 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 28 444 IPR010369 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00583 Phac-Chr5 4629672 4635288 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac5g00583 DUF966 1.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00583 - - vun:114179809 797.734