Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00581 ATGGAAGGCAAAGGTTTAGGAGAAGTCAGAAGGCTTCACATCATTTACTTCCTTAGTCAGATAGGTGGTCGTGCAGATCATCCTCATCTAATTCGTGTTCTTCATCTTACTCGTAATGGGGTTTATCTAAGAGATGTGAAGAGATGGCTTGGGGAATTGAGAGGGAAAGAATTGCCTGAGGTTTTTTCTTGGTCCTACAAGAGGAGGTACAAGAGTGGATACGTGTGGCAAGACTTGTTGGATGACGACCTCATAACCCCCATCTCTGACAATGAATACATCCTCAAAGGATCACAAATCCACACTATCCCATTTGCAACAACTCCTTCACTTGAAGAAAAGAAAACTACAGTTTGTGATATCCATGCTGAAAAGATGTGTCCTCAATCACAACTTGTAGAGGACAAAGAACACCAGCAGCAGCCGCAACAGTCCTTAACAGAAGAAGAATCTCAGATTCAAGCAGACCATAATTCTAAAACAAATTCTCCAACAAAAGGGTCATCAGAAATCAGCCAGGATTCGTTGGTCTTCAGCTCAGACAGGTCGTCTGTGACAGATGATGACTCTTCTAAGGTTGAAGAAGAGAAGCACTTAGAGATCAAAACAGGCAAAGAGAGTTTCAATGAAATGCATCAGGAGAAATTAGAGACTTGCACATTGCCTTCCTTGTATCACAATTTATTGAGTAAGAAGGGCACCCACAAAGATGACCAAAATAAAACTCACTCACCTGATTCATCCTTGTCCACCATTTCGTCCTCATCGTCATCTCAATCATCCTTTACTAAGATCAGAAGCAATTCTACAAAAGTTTCTAACATATTTCGAAATTGGATCACTTGTGGCACTGCGGATACAAATGATGCAGCACTCATCCTGATGAACCAGGCTCAAAAAAAAAACTCGAAGGAACCTAACAACATACCAGAAACAAAACCTGAGATTTGTAAGGGAGACCGATTGGGAGGATCAGAGAGGTGTTTTAGGACTTCTTGGGGTCATCACGACCAGAAACAGCAATATGGGGCAAGAAAAAGCTTTGATGGAGAGGAAACAAACGGGAGCAGGAAAAAGTTAGGCGACTTGCTAAGTCAAACTTCTTCCAAACCATTTGGTGGACCAATTTGCTCGCAATGTGGGAAGTCGTTTAAGCCTGAGAAAATGTACAAACACATGAAGTCTTGTAAAGGAATGAAAGCGTTGGGAAAGTCAGCTCCAAATGTTGAGGAGGCACAGCTTCCGAGATCATCAACTTCATCCCATACACACTACTTTTTGACCAACTAA 1290 0.4186 MEGKGLGEVRRLHIIYFLSQIGGRADHPHLIRVLHLTRNGVYLRDVKRWLGELRGKELPEVFSWSYKRRYKSGYVWQDLLDDDLITPISDNEYILKGSQIHTIPFATTPSLEEKKTTVCDIHAEKMCPQSQLVEDKEHQQQPQQSLTEEESQIQADHNSKTNSPTKGSSEISQDSLVFSSDRSSVTDDDSSKVEEEKHLEIKTGKESFNEMHQEKLETCTLPSLYHNLLSKKGTHKDDQNKTHSPDSSLSTISSSSSSQSSFTKIRSNSTKVSNIFRNWITCGTADTNDAALILMNQAQKKNSKEPNNIPETKPEICKGDRLGGSERCFRTSWGHHDQKQQYGARKSFDGEETNGSRKKLGDLLSQTSSKPFGGPICSQCGKSFKPEKMYKHMKSCKGMKALGKSAPNVEEAQLPRSSTSSHTHYFLTN* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00581 429 MobiDBLite consensus disorder prediction 232 264 - -
Phac5g00581 429 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 7 411 IPR010369 -
Phac5g00581 429 MobiDBLite consensus disorder prediction 185 209 - -
Phac5g00581 429 MobiDBLite consensus disorder prediction 244 264 - -
Phac5g00581 429 MobiDBLite consensus disorder prediction 133 184 - -
Phac5g00581 429 MobiDBLite consensus disorder prediction 411 429 - -
Phac5g00581 429 Pfam Protein SOSEKI, plant 13 307 IPR010369 -
Phac5g00581 429 MobiDBLite consensus disorder prediction 404 429 - -
Phac5g00581 429 MobiDBLite consensus disorder prediction 132 209 - -
Phac5g00581 429 MobiDBLite consensus disorder prediction 333 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00581 Phac-Chr5 4629672 4633180 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac5g00581 DUF966 8.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00581 - - vun:114179809 764.607