Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00526 ATGGAAAACCACCAAAACCACAAGGCAGAGCCAGAACCTGACAGAGACAAGAACCACCACCATAGCCAGGCCTGGGGCACGTGGGAGGAGTTGTTGCTGGCGTTTGCCGTCAACCGCCATGGCTCCAAGGACTGGGACACCGTCGCCATGGAGGTTCAGTCGCGCGCCACGCGCCTCCTCGCCACGGCGCGCCACTGCGAGCAGAAATTTCACGATCTCAGCCGCCGATTCGCCGACCAATGCAACGACGGCGTTACGCCGCCGCAACAGAACGGCGCCGCCGACGGCGACAACTCCGATCACGTCCCGTGGCTAGACGAATTGCGGAAACTCCGAGTCGCCGAGCTCCGGCGCGAGGTCCAGCGGAGCGACGTTTCCATTCTGTCGCTGCAGTTGGAGGTGAAGAGGCTGGAGGAGGAGAAAACGAAAGAGAATGACTGTAAAGACGACAAGAAACCAGATCTGGCGGTTTCCGGCGAAGCGCGGGCGGAAAACGACAAAACCGGCGGAGAAGTTGAGGAGGCTGGACCGGCGAATTCCGAACCGGAGAGAACCGCGAACGCTGGCAAGATGTTGCCAACAACGGGCGACGAATCGGACCGGGAGAATCAGTCAGTTAACGAGTCTAACTCAACCGGTTCGAGGTTTGACAAAACCGGGGAAGGTGAAGCAAAGTTAAAAGTCGAACCGGATCCGGTTCAGACCGGTTCGAAAGAACCGGACCCGGTTGCGAGGAAGGGAAAGCCGGTTGGGGAGGAGTCTAATAACGGAAGCTACGATGCGTTAGCGAAGGTGCCAACGTGTGAGTCGGTGCCTCCGAGTGACGAGAGGAAGGTGGAGCAGGACGATGACTCGTCTGAGTTGCACGACTCGGTGGCTCACTCTGGAGAGGGAGGGACGAGGGAGAGCAGCGAGGTGCAGAGCTCAGCCAGCTTGACGAGGAAGAGGAAGACGCGGCGGAGAAAAGAGGTATCCGGCAGCGACGGTCGTGGAGGTGGGACCTCCACACCGCCGGAGAACAACGAGGTGGCGATGGTTAAATCAGAACCGTTGGTTGGGGTTTTGGAGTTGATCAAGGGGCACGAGCACAGCTCATTCTTCGAGCGCCGTCTTGAAAGCCAGCTGGAGTCGGACAGATACAAAGATATAGTGAAACAGCCTCTGGACCTGGAAACCATACAATTAAGAATCCAGAAAGGCCAGTATTCCTCGTGCACCAGTGCATTCTTCCGCGATCTCCTCCTCCTTTTCACCAATGCCATCGTCATCTTCCCCCATGACTCTCCGGAGTCACAAGCGGCACGGCAGCTGCACCGCCTTGTCACCACCGAGATGAAGAACTACGTCCAAGCGCAGTCCGACCCTATCCCCCGGAAGAACGATTCACTCCCTCCAAACGTACCATTAGCCAAACCAGATTCTCTCTTTTCCAAGAACAAAGCCTCTGGTCCTATATTGGTTTGCCGCAAACGCAGTTCAATGTCAGCGAAACCTTCCTCGACCACTTTTGGTCAAAAGGGGAATGACCAACCCGTCTTCAATGACAAGAAGGAAAGGCCATCTTCTGATTCAAAACCTCCCATGAAACCTTCTTCTTCTGATACAGACGAAGAGGAGCCTCCCAAGGCCAAGGAAAAGCCTGTCACTGGAGCGAGAAGCCTTAGAAGGAGCAACAAGAACCTCAACAATAAGAAACTTTCCTCTAACTCCACTCCTAAGGCAGGGTCCTCCGGTAACAAGCCATCTGAGACCCTTAAACCAGAGAAGAGCAAAGCAGAGGGAGGGCCTGACAAGAAGAGGAATGCTGCTGCAGATTTCTTGAAGCGGATAAAGCGTAATACTTCAGTGGAAGCAGTGAAGGGTGGTAGCGGTGGTGGTGGTGGTGGAGGAGCAGGAAGTAGTAGCAGCAGCAAGGGAGGTGGAGGTGGTGTTGGCGTGAAAGATCAGAAGAAAATGGTGAATAATGGAAAGGGGGATAAAGGGAAAGAAAGGGCATCAAGGCATAGTGGTGGAGGGGGATCAGGGTCTGGGGATAAAAGGAATAAGAACATTGAGAACAACTCTCAGTCAAAGAGGAGTGTAGGTAGACCTCCAAAGAAGGTAGCGGAGACAAATGCAGGAAGTTCAAAGCGTGGGAGGGAAAATAGTGCCAGCGCTGGCAAGGATAAGCGACCCAAGAAACGTTCCAAGAAATGA 2196 0.546 MENHQNHKAEPEPDRDKNHHHSQAWGTWEELLLAFAVNRHGSKDWDTVAMEVQSRATRLLATARHCEQKFHDLSRRFADQCNDGVTPPQQNGAADGDNSDHVPWLDELRKLRVAELRREVQRSDVSILSLQLEVKRLEEEKTKENDCKDDKKPDLAVSGEARAENDKTGGEVEEAGPANSEPERTANAGKMLPTTGDESDRENQSVNESNSTGSRFDKTGEGEAKLKVEPDPVQTGSKEPDPVARKGKPVGEESNNGSYDALAKVPTCESVPPSDERKVEQDDDSSELHDSVAHSGEGGTRESSEVQSSASLTRKRKTRRRKEVSGSDGRGGGTSTPPENNEVAMVKSEPLVGVLELIKGHEHSSFFERRLESQLESDRYKDIVKQPLDLETIQLRIQKGQYSSCTSAFFRDLLLLFTNAIVIFPHDSPESQAARQLHRLVTTEMKNYVQAQSDPIPRKNDSLPPNVPLAKPDSLFSKNKASGPILVCRKRSSMSAKPSSTTFGQKGNDQPVFNDKKERPSSDSKPPMKPSSSDTDEEEPPKAKEKPVTGARSLRRSNKNLNNKKLSSNSTPKAGSSGNKPSETLKPEKSKAEGGPDKKRNAAADFLKRIKRNTSVEAVKGGSGGGGGGGAGSSSSSKGGGGGVGVKDQKKMVNNGKGDKGKERASRHSGGGGSGSGDKRNKNIENNSQSKRSVGRPPKKVAETNAGSSKRGRENSASAGKDKRPKKRSKK* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00526 731 MobiDBLite consensus disorder prediction 584 615 - -
Phac5g00526 731 CDD Bromodomain 354 445 - -
Phac5g00526 731 MobiDBLite consensus disorder prediction 218 234 - -
Phac5g00526 731 SUPERFAMILY Bromodomain 351 457 IPR036427 GO:0005515
Phac5g00526 731 MobiDBLite consensus disorder prediction 679 694 - -
Phac5g00526 731 Pfam Myb-like DNA-binding domain 23 72 IPR001005 -
Phac5g00526 731 Coils Coil 120 140 - -
Phac5g00526 731 ProSiteProfiles Bromodomain profile. 359 431 IPR001487 GO:0005515
Phac5g00526 731 MobiDBLite consensus disorder prediction 553 583 - -
Phac5g00526 731 SMART bromo_6 340 450 IPR001487 GO:0005515
Phac5g00526 731 MobiDBLite consensus disorder prediction 511 552 - -
Phac5g00526 731 MobiDBLite consensus disorder prediction 271 296 - -
Phac5g00526 731 MobiDBLite consensus disorder prediction 450 731 - -
Phac5g00526 731 MobiDBLite consensus disorder prediction 139 171 - -
Phac5g00526 731 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 13 731 - -
Phac5g00526 731 Pfam Bromodomain 355 435 IPR001487 GO:0005515
Phac5g00526 731 MobiDBLite consensus disorder prediction 297 311 - -
Phac5g00526 731 MobiDBLite consensus disorder prediction 652 667 - -
Phac5g00526 731 MobiDBLite consensus disorder prediction 139 344 - -
Phac5g00526 731 CDD SANT 24 73 IPR001005 -
Phac5g00526 731 MobiDBLite consensus disorder prediction 1 23 - -
Phac5g00526 731 MobiDBLite consensus disorder prediction 82 102 - -
Phac5g00526 731 Gene3D - 350 461 IPR036427 GO:0005515
Phac5g00526 731 MobiDBLite consensus disorder prediction 493 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00526 Phac-Chr5 4128939 4134184 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac5g00526 Bromodomain 2.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00526 - - gmx:100779988 1080.86