Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac5g00515 | ATGGCTTCTCTTCACTCTTCTCTTCTCTTGCCTCCAAATCTCCTTTCCCTCACTACCCCTTCAACTTCCCCTTCACACATTCTCTTCAACCTCAGACCCTCCACCACCCACTTGCGACCCCTTTCCACCACACAGCGCCACCGTTTTGGGAGACCCTTCGTGGTGGCTGAGCAGGCCACGGTGACGGAGGCCGCGAGGAGGCTCTACGTCGGCAACATTCCTCGCACTGTCAACAACGATGAGCTCTCCAAGATTGTTCAGGAACATGGCGCTATTGAGAAAGCTGAGGTTATGTATGATAAATACTCTGGAAGGAGCCGTCGATTTGCATTTGTTACAATGAAAACTGTTGAGGATGCAAATGCTGTGATTGAGAAACTTAACGGCACTGAAATTGGAGGGCGTGAGATCAAAGTAAATGTTACCGAAAAACCTTTATCAACATCAGATTTGCCTTTATCCCAATCTGAGGAATCTCAATTTATTGACAGTCCCAACAAGGTGTATGTGGGAAATCTAGCCAAGACAGTAACAACTGATACTCTTAAAAAGTTTTTTTCTGAGAAGGGAAAAGTTCTGAGTGCCAAGGTTTCACGGGTCCCTGGTACCTCAAAATCCAGTGGGTATGGTTTTGTTACTTTTTCATCAGAAGATGATGTAGAAGCTGCAATCTCGTCTTTCAACAATTCTTCATTAGAAGGGCAAAAAATCCGAGTGAACAAGGCATAG | 729 | 0.454 | MASLHSSLLLPPNLLSLTTPSTSPSHILFNLRPSTTHLRPLSTTQRHRFGRPFVVAEQATVTEAARRLYVGNIPRTVNNDELSKIVQEHGAIEKAEVMYDKYSGRSRRFAFVTMKTVEDANAVIEKLNGTEIGGREIKVNVTEKPLSTSDLPLSQSEESQFIDSPNKVYVGNLAKTVTTDTLKKFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEDDVEAAISSFNNSSLEGQKIRVNKA* | 243 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac5g00515 | 242 | Gene3D | - | 152 | 242 | IPR012677 | - | |
Phac5g00515 | 242 | SUPERFAMILY | RNA-binding domain, RBD | 61 | 144 | IPR035979 | GO:0003676 | |
Phac5g00515 | 242 | CDD | RRM1_PSRP2_like | 67 | 146 | - | - | |
Phac5g00515 | 242 | Gene3D | - | 54 | 151 | IPR012677 | - | |
Phac5g00515 | 242 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 66 | 144 | IPR000504 | GO:0003723 | |
Phac5g00515 | 242 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 166 | 242 | IPR000504 | GO:0003723 | |
Phac5g00515 | 242 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 68 | 138 | IPR000504 | GO:0003723 | |
Phac5g00515 | 242 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 168 | 238 | IPR000504 | GO:0003723 | |
Phac5g00515 | 242 | SUPERFAMILY | RNA-binding domain, RBD | 155 | 242 | IPR035979 | GO:0003676 | |
Phac5g00515 | 242 | SMART | rrm1_1 | 167 | 240 | IPR000504 | GO:0003723 | |
Phac5g00515 | 242 | SMART | rrm1_1 | 67 | 140 | IPR000504 | GO:0003723 | |
Phac5g00515 | 242 | FunFam | 30S ribosomal protein 2, chloroplastic | 153 | 242 | - | - | |
Phac5g00515 | 242 | PANTHER | OS02G0815200 PROTEIN | 63 | 241 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac5g00515 | Phac-Chr5 | 4044583 | 4048088 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac5g00515 | 68 | 242 | Eukaryotic Initiation Factors Gene Family | AT2G23350 | 32.000 | 1.40e-17 | 79.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac5g00515 | K13126 | - | gmx:100811197 | 367.851 |