Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00514 ATGGCGCCGAAGAAGCCGAGAAGCACGTCGAGGAACCCTGAACTCATTAGGGGTATTGGGAAATACTCGAGGTCACAGATGTACCACAAGAGGGGCATCTGGGCCATCAAGGCCAAAAACGGTGGCGTTTTCCCTCGCCACGACCCCAAGCCCAAGCCCGACTCCCCGGCCCAGAAGCCTCCCAAGTTTTACCCTGCCGACGATGTCAGGAAGCCCCTTCTCAACAAGCACAAGCCAAAGCCCGCCAAACTCAGGGCTAGCGTTACTCCAGGAACAGTGTTGATCCTGCTTGCTGGGAGGTTTAAGGGAAAGAGGGTTGTTTTCCTGAAACAGCTTCCATCTGGATTGCTTCTTGTAACAGGTCCCTTTAAGATCAACGGTGTTCCCCTTAGAAGGGTGAACCAATCATATGTCATTGGTACATCCACAAAAGTGGACATCTCTGGTGTTAATGTTGATAGATTTGATGACAAGTACTTTTCCAAGGATGCCAAGAAGAAGAGAACAAAGGGAGAAGGCGAGTTCTTTGAGGCAGAGAAGGAGGAGAAAAATGTGCTTCCCCAAGAGAAGAAAGATGACCAAAAAACCGTGGATACTGCTTTGTTAAAGGCAATTGAGAGTGTTCCAGACCTGAAGTCTTACTTGGGTGCTAGGTTTTCTTTGAAGGCAGGAATGAAGCCCCATGAACTAGTCTTCTAG 699 0.4907 MAPKKPRSTSRNPELIRGIGKYSRSQMYHKRGIWAIKAKNGGVFPRHDPKPKPDSPAQKPPKFYPADDVRKPLLNKHKPKPAKLRASVTPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDRFDDKYFSKDAKKKRTKGEGEFFEAEKEEKNVLPQEKKDDQKTVDTALLKAIESVPDLKSYLGARFSLKAGMKPHELVF* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00514 232 MobiDBLite consensus disorder prediction 1 21 - -
Phac5g00514 232 Pfam Ribosomal protein L6e 125 232 IPR000915 GO:0003735|GO:0005840|GO:0006412
Phac5g00514 232 Gene3D - 86 169 IPR014722 -
Phac5g00514 232 CDD KOW_RPL6 80 232 IPR041997 -
Phac5g00514 232 Pfam Ribosomal protein L6, N-terminal domain 4 60 IPR005568 GO:0003735|GO:0005840|GO:0006412
Phac5g00514 232 SUPERFAMILY Translation proteins SH3-like domain 86 172 IPR008991 -
Phac5g00514 232 FunFam 60S ribosomal protein L6 86 170 - -
Phac5g00514 232 MobiDBLite consensus disorder prediction 39 82 - -
Phac5g00514 232 PANTHER 60S RIBOSOMAL PROTEIN L6 1 232 IPR000915 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00514 Phac-Chr5 4041933 4044068 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00514 3 232 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 79.741 3.70e-121 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00514 K02934 - gmx:100784101 438.343