Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00500 ATGGGCACGTGTCCTTCTCACTGCCCACACAATGAGTCAGTTGTTCTGATGGCTGTGCCATCATTCTCCTCTTCCTTCACCTACGACGTCTTCCTCAGCTTCAGAGGAGAAGATACTCGTTACGGTTTCACCGGCAATCTCTATACAGCCCTTCATGACAGCGGAATTTACACCTTCATCGATGACGAGGAGCTCCCCAAAGGAGACGAAATCACCACCTCACTACAGAAGGCAATCGAAGGTTCCAGAATTTTCATCATCGTTTTCTCTCACAACTACGCATCTTCTTCCTTTTGCTTGAACGAGCTCGCCTACATTCTTCCCTACGCTAAGAGAAATGGTTTGCTGGTTTTGCCACTCTTCTACGACGTCGTTCCTTCCCACGTGCGACACCACACGGGTACCTTTGGAGAAGCGTTAGATACTCATGAAAACAAGTTCAAAGGTACGAGTGAGGGTTTTGAGCTTAACATGGAGAAGCTCAACAGATGGAAGATGGCTCTGCGTGGAGCTGCTAACTTATCTGGCTATCATTTCAAACATGGGGAGGAATATGAATACCAGTTTATCAAGAGGATAGTGAAATTGGTCTCTAACAAGATTAACCGTGCTCCTTTACATGTTGCGGATTATCCAGTTGGACTAGAGACACGAATGCTAGAAGTAAAGTTGCTTCTAGATGTAGGATCTGATGATGGTGTCCACATGGTAGGGATCCATGGATTCGGTGGAGTTGGTAAAACCACACTTGCTCTTGCAGTTTACAACTCCATAGCTGACAATTTTGAAGGCTTGTGTTTCCTTGAAAATGTGAGAGAGAATTCAAACAAACACGGCCTACAACATCTTCAGAGCCTCCTTCTTTCTCAAATGGTTGGAGAAAATAATATCAACATAACTAGTGTGAAACAAGGGATTTCAATGATGCAGCATAGGCTACGGCAGAAGAAGATTCTTTTGATTCTTGATGATGTTGACAAGCATGAACAGTTACAAGCAATTGTTGGAAGAGCTGATTGGTTTGGTCCCGGCAGTAGAGTCATCATCACAACTAGGGACAAACATTTGTTGTCATGTCAGTTGGTTGAAAAAATATATGAAGTGAAGAAGTTGAAAAAGAAAGATGCTCTTCGACTGCTTAGTTGGAAAGGTTTTAAAACAGAAGAAGTTCATCCAAGTTATGTGAATGTCATGGGTCGTGTACTGGCTTATGCTTCTGGCCATCCATTGGCTTTGGAAGTAATAGGTTCGAAGTTGTTTAGAAAAAGTGTAAAAGAATGGGAATCTGCCATCCACCAGTATCAGAAAATTCCTAACAATCAAATCCTGGAGATGCTTAAAATAAGTTTTGATTCTTTAGAGGAAGTAGAGAAGAGTGTTTTTCTTGACATTGCTTGTTGTTTCAAAGGATATGCATTGTCAGAGGTGGAAAATATACTTCGTGCTCATTATGGTGATTGCATGAAATATCATATTGGGGTGTTGGTTGAAAAATCTCTCATAAAATATAGATGGAATTCTGTAGTTACATTGCATGACTTGATAGAAGACATGGGTAAAGAAATTGTCCGACAGAAATCACCAAATAAGCCAGGGAAGCGCAGTAGATTATGGTCACCAGAAGATATAATTCAAGTTTTGGAAGACAACTCGGGAAGTGGAGAAATTGAAATCATATGTTTGAATTACTCTTTACCTGACAAAGAAGAAATAGTAGAATGGAACAGAAAGGCCTTCAAGAAGATGAAAAACCTCAAAACACTTATTATTAAAAGTGGTAATTTTTCGGAAGGTCCTAAATATCTTCCAAACAGTTTAAGAGTAATGGAATGGTTAAAATATCCTTCACAAGGGCTACCGCCAGATTTTCGTTCAAAGGAACTTGCCATATGCAAATTACCTGCAAGTTGTTTTGGGTCACTCGAATTGGCCGAGTTATCAAAGAAGTTCATGAATATGACCCTTTTGAATTTTGACGAATGTGAAGGTTTAACACAGATACCTGATGTATCTGGGCTGCCAAATTTAGTAGAAATTTCATTCAAGAATTGTAAGAGTTTAATTACAATCCATGACTCCATTGGGCTCCTAGGTAAGCTTAACTCCTTGAATGCTGTTGGTTGCAGCAAGCTTAGGAGTTTTCCACCCCTCAAATTGACTTCTCTGGAAAATCTTGAACTTTCATATTGTTACAGTCTTGAGAGCTTCCCAGAAATATTAGGGAAAATGGGAAAGATAACAGAACTTTTCTTGGAGTGCTGTGACATAAAAGAATTGCCATTTTCATTTCAAAATCTCACTGAGCTTCAAACATTACAGTTGCGTTACTGTCCCATGTTAAGGTTGCCAAGTAGTATTGTCATGATGCCAAAACTGACCAAGATTATTGCTTGGGAATCTGAAGGATGGTTATTTCCAAAACAGGTTGAGGGTGAAGAGAAAGTAAGCTCAATGGTGTCTTCAAGTGTAGATTGTCTTCTTCTCCCAGGGTGCAAACTCTCAGATGATTTTTTCCCAATAACATGGTTTGCTAATGTAAAAGAGTTAGACCTGTCAAGGAATACTTTCACGGTTCTTCCTGAATGCATAAGCAATTGTTATTTTTTATGTAAGCTTATTTTAGATAACTGTCATAGTCTTCGAGAGATTAGAGGGATTCCGCCAAACATACGACATTTATCAGCAAGATATTGTAAATCCTTCACTTCTTCTGGCAGAAGCACTTTACTGAATCAGAAACTGCATGAGACGGGAAACACCATGTTTTGGTTTTCAGGAGCAAGTTTTCCAGAATGGTTCGAGCACCGCAGTCAGGGACCATCTTGTTCTTTCTGGGTTGGGAACAAATTCCCTGCCATTGCTCTTTGTATTGTTATTGGACCAACTCATTTGGACCATATTGAGATTGTTGGACCTATCATGATCATCAATGGCATTGACTGTTCACTTGTTGATGGGTTGGTTAATCCTTATTTATGGATACCCCCTCATCACACATATCTTTTCGATTTGCAACATATAGTTTCTTCAGATTATCTTGACAGATTTGTTTCAGAAAAGGAATGGAATCACGTGGAGATTAGATACTCAGTCAAGCAGAGATTCAGTGAAAAAGACAAACATGTGGTGATACCAGTCTCTATAGAAAATGGAATCTATGTGTTCAAACAGAGGAGCAGCATGGAGGATATTCAATTCACTGATCCCCACAAAAAGAGAAGATTAGATGTTGATCCAGAGTAG 3243 0.3969 MGTCPSHCPHNESVVLMAVPSFSSSFTYDVFLSFRGEDTRYGFTGNLYTALHDSGIYTFIDDEELPKGDEITTSLQKAIEGSRIFIIVFSHNYASSSFCLNELAYILPYAKRNGLLVLPLFYDVVPSHVRHHTGTFGEALDTHENKFKGTSEGFELNMEKLNRWKMALRGAANLSGYHFKHGEEYEYQFIKRIVKLVSNKINRAPLHVADYPVGLETRMLEVKLLLDVGSDDGVHMVGIHGFGGVGKTTLALAVYNSIADNFEGLCFLENVRENSNKHGLQHLQSLLLSQMVGENNINITSVKQGISMMQHRLRQKKILLILDDVDKHEQLQAIVGRADWFGPGSRVIITTRDKHLLSCQLVEKIYEVKKLKKKDALRLLSWKGFKTEEVHPSYVNVMGRVLAYASGHPLALEVIGSKLFRKSVKEWESAIHQYQKIPNNQILEMLKISFDSLEEVEKSVFLDIACCFKGYALSEVENILRAHYGDCMKYHIGVLVEKSLIKYRWNSVVTLHDLIEDMGKEIVRQKSPNKPGKRSRLWSPEDIIQVLEDNSGSGEIEIICLNYSLPDKEEIVEWNRKAFKKMKNLKTLIIKSGNFSEGPKYLPNSLRVMEWLKYPSQGLPPDFRSKELAICKLPASCFGSLELAELSKKFMNMTLLNFDECEGLTQIPDVSGLPNLVEISFKNCKSLITIHDSIGLLGKLNSLNAVGCSKLRSFPPLKLTSLENLELSYCYSLESFPEILGKMGKITELFLECCDIKELPFSFQNLTELQTLQLRYCPMLRLPSSIVMMPKLTKIIAWESEGWLFPKQVEGEEKVSSMVSSSVDCLLLPGCKLSDDFFPITWFANVKELDLSRNTFTVLPECISNCYFLCKLILDNCHSLREIRGIPPNIRHLSARYCKSFTSSGRSTLLNQKLHETGNTMFWFSGASFPEWFEHRSQGPSCSFWVGNKFPAIALCIVIGPTHLDHIEIVGPIMIINGIDCSLVDGLVNPYLWIPPHHTYLFDLQHIVSSDYLDRFVSEKEWNHVEIRYSVKQRFSEKDKHVVIPVSIENGIYVFKQRSSMEDIQFTDPHKKRRLDVDPE* 1081
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00500 1080 SUPERFAMILY Toll/Interleukin receptor TIR domain 21 177 IPR035897 -
Phac5g00500 1080 Pfam NB-ARC domain 222 451 IPR002182 GO:0043531
Phac5g00500 1080 Gene3D - 370 454 IPR042197 -
Phac5g00500 1080 FunFam Disease resistance protein (TIR-NBS-LRR class) 24 203 - -
Phac5g00500 1080 PRINTS Disease resistance protein signature 312 326 - -
Phac5g00500 1080 PRINTS Disease resistance protein signature 405 419 - -
Phac5g00500 1080 PRINTS Disease resistance protein signature 717 733 - -
Phac5g00500 1080 PRINTS Disease resistance protein signature 236 251 - -
Phac5g00500 1080 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 785 IPR044974 GO:0006952
Phac5g00500 1080 ProSiteProfiles TIR domain profile. 26 201 IPR000157 GO:0007165
Phac5g00500 1080 SMART till_3 27 174 IPR000157 GO:0007165
Phac5g00500 1080 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 198 464 IPR027417 -
Phac5g00500 1080 Gene3D Ribonuclease Inhibitor 810 921 IPR032675 -
Phac5g00500 1080 SUPERFAMILY "Winged helix" DNA-binding domain 441 548 IPR036390 -
Phac5g00500 1080 Gene3D Ribonuclease Inhibitor 557 809 IPR032675 -
Phac5g00500 1080 Gene3D - 25 198 IPR035897 -
Phac5g00500 1080 SUPERFAMILY L domain-like 570 907 - -
Phac5g00500 1080 Gene3D - 199 364 IPR027417 -
Phac5g00500 1080 Pfam TIR domain 28 204 IPR000157 GO:0007165
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phac5g00500 Phac-Chr5 3932511 3937418 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00500 20 792 WRKY Transcription Factor Family AT4G12020 29.838 1.22e-72 263
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00500 - - gmx:100780257 1286.55