Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00492 ATGGATAAGGGGGTACCACCTAGCCTCTTCGTCAATGATGGTTCTTTCATGGAGAGGTTCAAGCAACTTCAACAAGAGCAGGAGAAAGGGAAGAATATCAAATTTGAGGATTCTAAACCAATTAAGGTTATTTCAGGGTCTTTGTCTCCCAATCCCTCCATTACCAAAACATCTGTGGACTTGAAGGTTAATGATACACGGAAAACATCCCAGGGTGCTTCTGGTGGCAAACTAGCTTTCAGTTTAAAACAAAAGTCAAAGCTGGTACCACCCCCTGTTAAGTTGAGTGCCGATGAAGATGAAGAAGAAACAGAAGCTGGGTATATTTCAAATGATGCACCACTAAAACGACAAAAGTTAGGCCAGGATGGCATTGACCAATCATCAAGACAACTTGATGTTGCACCTCCTTCCCCAAGTGATCCTACAGTGAAGAAAGTTGCTGACAAACTAGCAAGTTTTGTGGCAAAAAATGGAAGGCAATTTGAGGATGTTACGAGGCAAAAGAATCCCGGGGATACACCTTTCAAATTTTTATTTGATGAGAGATGTGCTGAATACAAGTACTACGAATATCAGCTTGCTCAAGAAGAAAAGGCTCTTGCGCAGTCAAGGGAATCACAGGTGCCTCGCAATGGGGGTACAAGCACTTCATCTTCCAAACAGACTAGTGGCCATCAAAGATCATCTCAGCAGCATACATCCTACCAAATTCCTGCATCTGCTTTATATGAAAGTGCTGACAATCCAAGAGCTTCTGGATCTTCAATTCAAGCATATTCAGTAGGAATCAGTGAAGAGCCCAGTGGTTCATCAAATGCTGATTCTTTGGCACTAATGGAGTTCTACATGAAGAAAGCTGCACGGGAAGACAAGTATAAACAACCTAAGTATTCAAAAGATGAGATGCCCCCTCCTGCATCTCTTCAAGGCAAAAAAGGCCATCACATGGGTGATTTCATTCCTCCAGAAGAACTTGAGAAGTTCCTGGCTAGCTGTAATGATGCTGCAGCACAGAAAGCTGCAAAAGAGCATGTAGAGAGGTCTAAGATTCAGGCTGATAATGTAGGCCACAGGCTCCTGTCAAAAATGGGTTGGAAAGAAGGTGAGGGTCTGGGCGGAACCAGGAAGGGTATTTCAGATCCTATCATGGCAGGTAATGTTAAGAAGAATAACTTGGGGGTTGGTGCTCAGGAGCCTGGGGAGGTGAGTTCTGAGGATGACATATACGAGCAGTACAAGAAGCGTATGATGCTTGGTTACCGTTACAGACCCAATCCTCTGAACAATCCTCGAAAGGCTTATTACTGA 1311 0.4371 MDKGVPPSLFVNDGSFMERFKQLQQEQEKGKNIKFEDSKPIKVISGSLSPNPSITKTSVDLKVNDTRKTSQGASGGKLAFSLKQKSKLVPPPVKLSADEDEEETEAGYISNDAPLKRQKLGQDGIDQSSRQLDVAPPSPSDPTVKKVADKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDERCAEYKYYEYQLAQEEKALAQSRESQVPRNGGTSTSSSKQTSGHQRSSQQHTSYQIPASALYESADNPRASGSSIQAYSVGISEEPSGSSNADSLALMEFYMKKAAREDKYKQPKYSKDEMPPPASLQGKKGHHMGDFIPPEELEKFLASCNDAAAQKAAKEHVERSKIQADNVGHRLLSKMGWKEGEGLGGTRKGISDPIMAGNVKKNNLGVGAQEPGEVSSEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00492 436 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 2 436 IPR040169 -
Phac5g00492 436 MobiDBLite consensus disorder prediction 122 136 - -
Phac5g00492 436 MobiDBLite consensus disorder prediction 44 77 - -
Phac5g00492 436 Pfam Surp module 146 195 IPR000061 GO:0003723|GO:0006396
Phac5g00492 436 SUPERFAMILY Surp module (SWAP domain) 131 198 IPR035967 GO:0003723|GO:0006396
Phac5g00492 436 Gene3D Surp module 118 204 IPR035967 GO:0003723|GO:0006396
Phac5g00492 436 MobiDBLite consensus disorder prediction 44 145 - -
Phac5g00492 436 MobiDBLite consensus disorder prediction 200 255 - -
Phac5g00492 436 ProSiteProfiles G-patch domain profile. 353 400 IPR000467 GO:0003676
Phac5g00492 436 SMART surpneu2 145 199 IPR000061 GO:0003723|GO:0006396
Phac5g00492 436 Pfam G-patch domain 354 397 IPR000467 GO:0003676
Phac5g00492 436 ProSiteProfiles SURP motif repeat profile. 147 190 IPR000061 GO:0003723|GO:0006396
Phac5g00492 436 MobiDBLite consensus disorder prediction 290 320 - -
Phac5g00492 436 SMART G-patch_5 351 398 IPR000467 GO:0003676
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00492 350 410 C2H2 Transcription Factor Family AT5G26610 49.180 1.36e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00492 K13096 - gmx:100786213 802.357