Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00454 ATGGATGATGGAAATGCTGAGCTTTCTGATAAGCTTTCAAATAATGTTCTATTTTTAAATCCAGAGTCATCTAGCAGTTTTCAGGCTTCAGCATCCGTGAACACAGTTCCTGAATTATGTAGGAGTAGCAGCAGAACATGCACCCACACTCACACATGCAACCCACCTGGCCCTGATGCTGCTCACACACACACATGCTATCACTCGCACACCCAGATTTTTGGACCTGAAGATGATGACGACAAGGAGCACACCAACTCCAAACCAAAAAGGCCTTCTGGCAACCGAGAAGCAGTTAGGAAGTACAGGGAGAAGAAGAAGGCACACACAGCATACTTGGAGGAGGAAGTTAAGAAATTGCGTTTGGTGAATCAGCAACTAGCGAGGAAATTACAAGGGCAGGCACTTCTTGAAGCAGAACTGGCAAGGTTGAGGAGCATTTTGGCACTCCTTAAGGGGAAAATAGACAGTGAATTGGGTGCTTTCCCCTTTCAAAATCAGTGTAACTCTTACATTCTCAAAGAAGGGGATGCTGGTTTGCTGTCTACTGCAAGGAGAATTGGCCTTCAGTGTCAGAACGACTTGCCATGCTTCCATCCACATGCAGGATCATCATCCCAGGTCAACATTTGTGCATATGGAAAGTCTGTGAGTCCATGGGAAGGAAACTGCCAACCTGAAATTGTAGATTGTCATGTAGATGCAAATAACTTGATCAGTACTGAAGGACAAACTGTGGAGACAGTGGATAACTTCTTGTCATCTGCATCTCAAGAGGGATAG 783 0.4508 MDDGNAELSDKLSNNVLFLNPESSSSFQASASVNTVPELCRSSSRTCTHTHTCNPPGPDAAHTHTCYHSHTQIFGPEDDDDKEHTNSKPKRPSGNREAVRKYREKKKAHTAYLEEEVKKLRLVNQQLARKLQGQALLEAELARLRSILALLKGKIDSELGAFPFQNQCNSYILKEGDAGLLSTARRIGLQCQNDLPCFHPHAGSSSQVNICAYGKSVSPWEGNCQPEIVDCHVDANNLISTEGQTVETVDNFLSSASQEG* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00454 260 CDD bZIP 95 142 - -
Phac5g00454 260 PANTHER CCAAT/ENHANCER BINDING PROTEIN 20 163 IPR031106 GO:0003700|GO:0006351
Phac5g00454 260 Gene3D - 76 151 - -
Phac5g00454 260 MobiDBLite consensus disorder prediction 71 105 - -
Phac5g00454 260 SUPERFAMILY Leucine zipper domain 90 132 IPR046347 GO:0003700|GO:0006355
Phac5g00454 260 MobiDBLite consensus disorder prediction 73 101 - -
Phac5g00454 260 Pfam Basic region leucine zipper 87 140 IPR004827 GO:0003700|GO:0006355
Phac5g00454 260 SMART brlzneu 83 150 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00454 Phac-Chr5 3555113 3557032 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00454 1 214 bZIP Transcription Factor Family AT2G16770 43.644 4.41e-50 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac5g00454 bZIP_2 3.4e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00454 K25785 - gmx:100527780 361.688