Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00443 ATGGCTAAGAAAGGTTGGTTTAGCATGATTAAGAAGATCTTTTTATGGGGGGCACAGTCCTCACCAACGAAGAAGGAAAAAAGAAGGGTGTGGATATTTGGGAGGGTTAAGACCAAGAGATTGCCTTCAATTGCAGCTCCACCACACTCTAAAGAAACGAGACTGAGTGAAGCTGAAGAAGAACACAACAAGCATGCTTTAACAGTGGCCATTGCTTCAGCTGCTGCTGCTGAAGCCGCCATTACTGCTGCTCAGGTTGCTGTTGAGGTTGTCAGGCTCCAATCAGCTCATCAACAACTTAATGAAAAACAAGAACAGCTTCAACCTATCAAAACTAGGCATGATGCTCCTCATTCCACACACCACTGCCAGAGGAAGATGGAAGAATCTTCAGCCATCAAAATTCAAACAGCATTTAGAGGTTACCTATCAAGGAAAGCTTTGAGAGCATTGAAGGGAATAGTGAAGCTTCAAGCTATCATTCGTGGAAGAGCTGTGAGACGCCAAGCTTTGTGCACTCTGAAGTGCTTGGAGTCCATAGTAAGTATCCAGTCACATGTCTTTGCAAGGAGACTCCAAATGGTTGAAGGAAAATGGGAATGTGGTGAACATGAAGATACAGAAGGTTCAAGAGACAAGATAATAAGGATGGACTCAAACAGTGAGAGAAGGTGGGATGACAGCATGTTGTTGAAGGAAGAGGTAGATGCCTCTTGCATGAGCAAGAAAGAAGCAGTTGTTAAGAGAGAAAGAGTAAAAGAATACTCATTTAACCACAGAAAGTCAGCTGAATCAGAAAGAGATAAGATAAATGGAAGATGGAGGTACTGGATGGAGCAGTGGGTAGACACACAACTTTCCAAGAGTAAAGAACTTGAAGATTTAGACTCAGTTTTCAGCTCACATCACTCTAGAACTGGGAAGGAAAGTGGAAGGAGACAACTAAAGATAAGAAATACTCAGATACAAAATCAGGTTGAAGGATTAGATTCTCCAGCACTTTCTTCAAGGAACACATTTCCCCACAGGAGCCAGACTTCAGAGGCAGAAAATCACTCATTCCCAAGCTCACCTGCAATTCCTACATATATGGCTGCAACAAAATCAACACAAGCAAAAGCAAGATCAACAAGCTCCCCAAGAGCAAGGACAGGAGGGAATTTTGACATGAACTCTGATAGCTATTCACCATGCAAGAAAAAGTTACCACTTGTGACTTCTATTAATCAGCAAAGATCCCCTAGCTTAAAGGGCCTTCCTAGACCTCTGAAATTAAGTCAGACATTGAGGGATCTCAGCATTAACTCAGATTGTTCAGTGCCAATTAGAGATCAAGAAAGTTGCTTCAAATGA 1353 0.4228 MAKKGWFSMIKKIFLWGAQSSPTKKEKRRVWIFGRVKTKRLPSIAAPPHSKETRLSEAEEEHNKHALTVAIASAAAAEAAITAAQVAVEVVRLQSAHQQLNEKQEQLQPIKTRHDAPHSTHHCQRKMEESSAIKIQTAFRGYLSRKALRALKGIVKLQAIIRGRAVRRQALCTLKCLESIVSIQSHVFARRLQMVEGKWECGEHEDTEGSRDKIIRMDSNSERRWDDSMLLKEEVDASCMSKKEAVVKRERVKEYSFNHRKSAESERDKINGRWRYWMEQWVDTQLSKSKELEDLDSVFSSHHSRTGKESGRRQLKIRNTQIQNQVEGLDSPALSSRNTFPHRSQTSEAENHSFPSSPAIPTYMAATKSTQAKARSTSSPRARTGGNFDMNSDSYSPCKKKLPLVTSINQQRSPSLKGLPRPLKLSQTLRDLSINSDCSVPIRDQESCFK* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00443 450 Pfam Protein of unknown function (DUF4005) 346 404 IPR025064 -
Phac5g00443 450 MobiDBLite consensus disorder prediction 298 315 - -
Phac5g00443 450 MobiDBLite consensus disorder prediction 298 395 - -
Phac5g00443 450 Gene3D iswi atpase 123 152 - -
Phac5g00443 450 ProSiteProfiles IQ motif profile. 152 179 IPR000048 GO:0005515
Phac5g00443 450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 171 IPR027417 -
Phac5g00443 450 MobiDBLite consensus disorder prediction 316 394 - -
Phac5g00443 450 ProSiteProfiles IQ motif profile. 128 156 IPR000048 GO:0005515
Phac5g00443 450 SMART iq_5 127 149 IPR000048 GO:0005515
Phac5g00443 450 Pfam IQ calmodulin-binding motif 130 149 IPR000048 GO:0005515
Phac5g00443 450 PANTHER IQ-DOMAIN 5-RELATED 1 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00443 Phac-Chr5 3490924 3494664 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00443 3 450 IQD Protein Family AT5G13460 42.443 3.57e-97 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00443 - - gmx:100794802 684.485