Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00428 ATGAGGGAGCTGAGATGGGACTCCCAGGGATTAAATCCAATAAGCCTTCTCATTGACTGTGCCAAATGTGTTGCATCTGGAAGCATTAAGAATGCAGATATTGGCCTTGAGTACATATCTCAGATTTCATCTCCTGATGGTAATGCAGTGCAGAGGATGGTGAGTTATTTCAGTGAAGCACTTGGATACAGGATAATAAAACATTTGCCAGGTGTATACAAATCTATCAATCCCTCAAAAACATCACTATCTTCAGAAGATATCCTTGTCCAGAAATACTTCTATGAATTGTGTCCCTTTTTGAAGTTCTCATACTTGATCACAAACCAAGCCATTGTGGAGGCCATGGAATGTGAAAAGGTGGTTCACATTATTGATCTCCATTGTTGTGAGCCAGCTCAGTGGATAGATCTTCTACTCACTTTCAAAAACCGTCAGGGAGGTCCACCCCATCTGAAAATTACAGGCATTCATGAGACAAAAGAAGTGTTAGACCAGATGAACTTTCATCTGACATCTGAAGCTGGGAATTTGGATTTTCCTTTACAGTTCTATCCAGTTGTTAGCAAACTAGAAGATGTTGACTTTGAGAAGTTGCCTGTTAAGACAGGAGATGCTATTGCAATAACTTCAGTTCTTCAGCTGCATTCGCTTCTTTCCACTGATGATGACATGGCTGGAAGAATCTCCCCAGCCGCAGCAGCATCTATGAATCTGCAGAGAGCAGTGCATATGGGGCAAAGAACTTTTGCTGAGTGGCTTGAGAGAGATATGATCAATGCATATATCTTAAGTCCTGATTCTGCATTGTCACCTCTTTCCTTTGGTGCCTCGCCTAAGATGGGGATTTTTCTGAACGCCATGCGAAAGCTCCAACCAAAACTGGTAGTAGTTACTGAACAAGAGTCAAATCTGAATGGATCAAATTTGATGGAGAGAGTTGATAGAGCATTGTACTTTTACAGTGCCTTGTTTGACTGCTTGGACTCTACTGTAATGAGAACATCAGTTGAGAGGCAAAAACTTGAGAGGATGCTTCTTGGAGAGCAGATAAAAAACATCATTGCCTGTGAGGGAGTTGATAGAAAGGAAAGACATGAGAAACTCGAAAAATGGATTCGAAGGCTTGAAATGGCTGGTTTTGTAAAGGTACCTTTGAGCTACAATGGGAGGATAGAAGCAAAGAATCTGTTGCAGAGATATAGTAGTAAATACAAATTTAGAGAAGAGAATGATTGTTTGCTTGTCTGCTGGAGCGATAGACCATTGTTTTCTGTATCAGCTTGGAATTCACCATACCCGTGGCTCAAAGATATGAATGGGGAGGATAGGGATAAATACCTGGCTCGTATTCTTAACGCCTGTGCCAAGTTTATTGAATCAGGAAGCATCATGAATGCAGATACTGGACTGGACTATATTGCTCACATTGCCTCCCCTTATGGTGATGCAATGCAAAGGGTAGCCACCTATATCAGTGAGGGTCTAGCTTTCCAAGTCCTGAAAAATTTGCAGGGAGTACCTAAAGCTGTTAATCTGTCAAAAACAATGTCAACCTCGGAAGAACAACTTGTTAAGAAGACATTCTATGACCTGTATCCATTTTTAAAAACTGCATATGTAATCACAAGTCATGCCATTGCTGAAGCTATTGAAGGAGAAGAATTGCTCCACGTCATTGATCTTGGTGCATCTGATGCTGCTCAGTGGATTTATCTTATGCACAGATTAAAAGAAAGCCAAAAGAGCCCCCAAGTTCTGAAAATCACAGGCATACATGAGAAGGAGGAAATTCTAGAGGAAGTGGCCACTCAACTAAGAGTAGAAGCTAAAAGTTTGCATTTCAAGCTCCAATTCAATGCTATTGTAAGCACTTTGGAGAATCTTGACCTTGAAGAATTGCCTGTGCAGAAAGGAGAGCTTCTTGCAATCAGCTCAGTGCTTCAGCTGCACACTCTTCTGGCCACTGATGATGCAATGGTCTGCACCAGGAGCTCGCAGGAAGAACCAATGCATCAAAGGACATTTGCTGAGATGCTTGGGAAACAAAAGACCAACCCCAGTTCTGAATCATCGTTGTTACAGGTTCCTCTGTGTGCTACTTCTACCAAGATGATGCACTTTCTAAATGGCCTGTGGAAACTCCAACCTAGAGTGATGGTGGTTACTGAACAAGAATCCAATGTCAATGGTTCTTTGACAGAAAGGGTTGACAAAGCATTGGACTTTTATGGTGCATTGTTCAACTGTTTGGAGTCAACTGTTTCAACAACACTAGTAGAGAGAATCATCATGGAAAGGACTCTACTAGGGCAAGAAATAAAGAACATTGTTGCAGGTGAAGGAGTTGAGAGAAAGGAGAGGCATGAGAAATTTGAGACTTGGATCCCAAAGCTAGAAATGGCCGGGTTTGAGAAGAAACATATTAGCCATCATGGGATGATGCAAGCAACAAAACAGTTGCATGGTTATGGAAATGGATACAAGCTTTGTCCGGAGAATAATTGTTTGTTTGTATGCTGGAATGATAAGCCACTATTTTCTGTGTCAGCCTGGACAGTTTAG 2565 0.4156 MRELRWDSQGLNPISLLIDCAKCVASGSIKNADIGLEYISQISSPDGNAVQRMVSYFSEALGYRIIKHLPGVYKSINPSKTSLSSEDILVQKYFYELCPFLKFSYLITNQAIVEAMECEKVVHIIDLHCCEPAQWIDLLLTFKNRQGGPPHLKITGIHETKEVLDQMNFHLTSEAGNLDFPLQFYPVVSKLEDVDFEKLPVKTGDAIAITSVLQLHSLLSTDDDMAGRISPAAAASMNLQRAVHMGQRTFAEWLERDMINAYILSPDSALSPLSFGASPKMGIFLNAMRKLQPKLVVVTEQESNLNGSNLMERVDRALYFYSALFDCLDSTVMRTSVERQKLERMLLGEQIKNIIACEGVDRKERHEKLEKWIRRLEMAGFVKVPLSYNGRIEAKNLLQRYSSKYKFREENDCLLVCWSDRPLFSVSAWNSPYPWLKDMNGEDRDKYLARILNACAKFIESGSIMNADTGLDYIAHIASPYGDAMQRVATYISEGLAFQVLKNLQGVPKAVNLSKTMSTSEEQLVKKTFYDLYPFLKTAYVITSHAIAEAIEGEELLHVIDLGASDAAQWIYLMHRLKESQKSPQVLKITGIHEKEEILEEVATQLRVEAKSLHFKLQFNAIVSTLENLDLEELPVQKGELLAISSVLQLHTLLATDDAMVCTRSSQEEPMHQRTFAEMLGKQKTNPSSESSLLQVPLCATSTKMMHFLNGLWKLQPRVMVVTEQESNVNGSLTERVDKALDFYGALFNCLESTVSTTLVERIIMERTLLGQEIKNIVAGEGVERKERHEKFETWIPKLEMAGFEKKHISHHGMMQATKQLHGYGNGYKLCPENNCLFVCWNDKPLFSVSAWTV* 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00428 854 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 12 429 IPR005202 -
Phac5g00428 854 ProSiteProfiles GRAS family profile. 439 853 IPR005202 -
Phac5g00428 854 ProSiteProfiles GRAS family profile. 4 430 IPR005202 -
Phac5g00428 854 Pfam GRAS domain family 14 429 IPR005202 -
Phac5g00428 854 Pfam GRAS domain family 450 853 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00428 Phac-Chr5 3414015 3419586 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00428 407 852 GRAS Transcription Factor Family AT1G50420 42.227 5.17e-119 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac5g00428 GRAS 1.8e-117 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00428 - - gmx:106798410 818.15