Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00424 ATGGGTTCTAAGTGTGAAGAGACTAAAGATGATGAAGAAAATGATCCATGCCTATCTGCTATGCTGCTAAGCTTCAGTCCAATGGTTTACACTGCTGTGTTGAATGCTGCCATTGAGCTGAACTTGTTTGAGATGATTGCCAAGGCAACAAGAAGAAGAACAACAGAAACCCCACTTGGTGTGTCAGCTTCTGAGATTGCTTCTCAACTTCCAATTCAGCACAAAAAACTACCCCAAAGGCTTGATCGCATGCTGTCTCTTCTTGCAAGTCACTCTCTTCTCACTTGCTCAACACGCGCAAATCAAGATGGTAAGCTCCAAAGACTCTTTCAACTTTCACCTTCTGGAAAGTACTTCCTCAACGCTGAAGCCACTGCTTCTTTGGCCTTGTTCTCAACGTTTATGAGTCATCCAAAGCTCGTTCAGGCATTGCTTAATTTCAAGGAGGTACTTCTTGACTGTGATACTGGTGTATACATGAAAGTTCATGGAATGCCTATTTATGAAGGCATACAATCTGATCCACCATGGAATCATATCTTTAATCAAGCAATGGCCAATATATGCACAACAGAGATGACACAGATACTTCAAATATACACTGGATTTGAAGGAATATCAGTGCTCATCGATGTTGGAGGTGGAATAGGGCAAAGTTTGAATATGATAATCTCCAAATATCCTTCCATAAAGGGTGTCAATTTTGATCTTCCACAAGTAATACAACAAGCTCCACCTTATCCAGGAATTGAACATGTTGAAGGAGACATGTTTGAAAGTGTTCCAAAAGGTGATGCCATACTATTGAAGGGCATATTGCACAATTGGTCGGATGAAAATTGTTTGAGAGTTCTGAATAATTGCCACAAAGCTTTGCCAGAAAATGGTAAGGTGGTTGTTGTGGATTTCATAATGCCCCAAGAAATTGGTTCTACTGAAGCAGATAAGATGGTTACTAGCTTTGATAACCTCATGTTTCTTGATGGAGGAAGTGAAAGAACAGAGAAAGAGTTCATGAGTTTATGCCAATCTTCTCAATTTTCTTCTTTCAAAGTTGTTTCTCGTGCCTTCACTGTTCTAGGAGTAATGGAATTTTATAAATAA 1104 0.3958 MGSKCEETKDDEENDPCLSAMLLSFSPMVYTAVLNAAIELNLFEMIAKATRRRTTETPLGVSASEIASQLPIQHKKLPQRLDRMLSLLASHSLLTCSTRANQDGKLQRLFQLSPSGKYFLNAEATASLALFSTFMSHPKLVQALLNFKEVLLDCDTGVYMKVHGMPIYEGIQSDPPWNHIFNQAMANICTTEMTQILQIYTGFEGISVLIDVGGGIGQSLNMIISKYPSIKGVNFDLPQVIQQAPPYPGIEHVEGDMFESVPKGDAILLKGILHNWSDENCLRVLNNCHKALPENGKVVVVDFIMPQEIGSTEADKMVTSFDNLMFLDGGSERTEKEFMSLCQSSQFSSFKVVSRAFTVLGVMEFYK* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00424 367 PIRSF O-mtase 1 367 IPR016461 GO:0008168
Phac5g00424 367 FunFam Caffeic acid 3-O-methyltransferase 2 119 - -
Phac5g00424 367 Pfam Dimerisation domain 33 89 IPR012967 GO:0046983
Phac5g00424 367 Gene3D - 29 196 IPR036388 -
Phac5g00424 367 SUPERFAMILY "Winged helix" DNA-binding domain 11 121 IPR036390 -
Phac5g00424 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 365 IPR029063 -
Phac5g00424 367 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 367 IPR016461 GO:0008168
Phac5g00424 367 CDD AdoMet_MTases 209 305 - -
Phac5g00424 367 Gene3D Vaccinia Virus protein VP39 178 355 IPR029063 -
Phac5g00424 367 PANTHER O-METHYLTRANSFERASE 31 353 IPR016461 GO:0008168
Phac5g00424 367 Pfam O-methyltransferase domain 157 347 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00424 Phac-Chr5 3396059 3397467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00424 1 359 Monolignol Biosynthesis Gene Families AT5G54160 44.022 7.26e-98 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00424 - - pvu:PHAVU_005G0323000 582.793