Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00413 ATGGCAACAGAGTTGATAGGTGGGGCATTTCTCTCAGCAGCCCTTCAAGTGATTTTTGATAGGTTGGCTTCAAGGGATGTCAAAGACTACTTCCATGGAAGGAAACTCAAGGATAAGATGCTCAAAAAGCTAGGTATTGTGCTGAATTCCATTAACCAAGTGCTGGAGGATGCAGAGGAAAGGCAGTACAAAAGCCCAAATGTGATGAAGTGGCTCGATCAGCTTAAAGAGGCTATATATGAAGCAGAATTGCTGTTAGATGAGGTTGCCAACGAGGCATCGCGACAGAAGCTGGAAGCTGAATTTGATCCTGCTACTAGCAAGGTGCGAGGCTTTTTCAGGGCTTTTGCTAATCCATTTGACAGAGAAATTGCATCTAGGGTTGAAGAACTACTAGAGAACATACAATTTCTTGCAAAGCAAAAGGATATGTTAGGATTAAGAAAGATAATTTGTGCTGAGAATGAAGTTGGAGTCAGTTGGAAACAATCCAACCAATTGCCTACTACATCCTTGGTGGATGAATCTAGAATTTGTGGTAGAGAGGAAGATAAAGAGGAAATCATCAAGATTTTACTTTCAGACAATGTCACATGCAATCAGGTGCCCGTAATTAGTATAGTGGGAATGGGAGGGATGGGTAAGACTACCCTTACTCAGCTTGTGTATAATGAACAAAGGGTACTAGATCAATTTGACCTTAAGGCTTGGGTCTATGTTTCCCAATATTTTGATGTTGTTGCTGTCACAAAAGCAATTCTTAAGGCACTTGGGTCCAAAGCAGCAGAAGAAAAAGACTTAAATCTACTTCAGCTTGAATTGAAGGAGAGACTGATGGGAAAGAGATTTTTGCTTGTTCTAGATGATGTTTGGAATGAAAACTATTCAAGTTGGGGGGCACTACAGATCCCCTTCATTTATGGATCTTCAGGAAGTAGGATTCTTATTACCACTCGTAATGAGAAGGTAGCATTGGTCATGAACTCCTCCCAACTATATCATTTAAAGCCATTGGAGAAAGAAGATTGTTGGAGGCTATTTTCGAATCTTGCATTTCATGACAAGGATGCCACCAAATATCCAAATCTTGTATCAGTTGGCAGTAAAATTGTTGACAAGTGTGGAGGATTGCCTTTAGCTTTAAAAACATTGGGAAATATCTTGCGAGTAAAATTCTCCCAGCATGAATGGGTTAAGATATTGGAGAGTGATATGTGGCACCTATCTGACAATGATGGCGACATTAACCCCGCTCTTAGATTGAGTTACCACAATCTTCCTTCCTATTTGAAGCGTTGTTTTGCTTATTGCTCCATATTTCCAAAAGATTATGAGTTTGACAGGGATCAGTTAATCCAGCTGTGGATGGCAGAAGGTTTGTTGAATTGCTGCCAAATAAATAAGAGTGAAGAAGAGTTAGGTAGTGAGCTCTTCAATGATCTAGTAGCAAGGTCATTTTTCCAACAAACAAGAAACCGTGCTTCGCGGTTCACTATGCATGATCTTCTTAATGGTTTAGCAAAATCTGTCTCAGGAGAATTTTGTTTACAGATAAGTGCCAATTTGGAGAAAAATATAACCAGGAGAACACGCCACATTTCATTGTCTCACAAAATTAACATTGATGATCAACTTTTGGAGCATATAAGTAAGTGTAACAGATTACGTTGTCTTGTGGCATTCAAATGGGAATTCGGCAGAGGAGGCTTGATCAACAGCAATAAACAACGTGTTTTGTTCTCTACATTGAAATATTTACGTGTGTTATCCTTCCATAATTGTCTTCTCACTGAGTTAGTTGATGATATAGGCAATTTAAAGCTTTTGCGTTATTTAGATCTTTCGTACACTAAGATTAAAAGATTGCCTGACTCCATTTGTAGGCTGCATAATTTGCAGACACTTTTACTATTCTGGTGCTATCATTTGGAAGAGCTTCCCGTAGATTTGCACAAACTTGTCGCCTTGCGTCATCTTGATTTGAGTATGAGCGGAATAAACAAGATGCCAAACCACATAGGAAGACTGAAACATCTTCAGACCCTGACTAGTTTTTTTATCAGGAAGAATGATGTTAAGGAATTGGGAAATCTCAGCAATCTTCAAGGAACACTTTCAATTTTCCGGTTAGAAAATGTCACTGATCCTGCGGATGCCATGGAAGCTAATTTGAAAGATAAAAGGCATTTAGATGGATTAGTGTTGAATTGGGGTGACAAATTTGGAAGGTGCAATGAAAATGAGGACTCAATAATAGAAAGACAGGTGTTGGAGGCTCTTCAACCAAATGAGAACTTGAAAAAGCTTTCTGTTTTACGTTATGATGGAACTAGCTTTCCAAGTTGGTTTGGGGGATCTCATTTGCACAATTTAGGGTCCATAGCACTGACTGAAAGCAAATTCTGCTTTGTCTTGCCACCATTTGGGCAGCTTCCCTCTCTGAAGGAGCTTTCCATATCATGCTTTCATGGAATAGAAGTCATTGGTCCCGAGTTCTGTGGTAATGATTCCTCAAATATTCCTTTCAGATCTCTTGAAATTTTAAAATTTGAGGAAATGAGTGCATGGAAAGAATGGTGCAGTTTTGAAGGTCATGGTGAAGAAGGCCAAGGTTTGTCTTGTCTTAAAGAGCTTTCTGTGAGGCGTTGTCCTTGGTTGAGAAGGGCCTTGCCTCAACACCTTCCTTCTCTGCAGAAGTTGGTAATTTGTGAATGCCAATACTTAGAGGATTCAGTTCCCAAGGCTGCTAGTATACATGAGATAAAGTTGCATTTGTGTGAAAAACTTTTCCTGAAAGATTTGCCATCCAGTTTGAAAAAGGCCACAATTCAAGGAACTTGCATCATTGAGTCATGCCTCCAGCAAATTCTTGTCAACAATGCCTTCCTTGAAGAGTTGAAAATACACGACTTTCATGGTCCAAATAAAAAATGGTCCTCTTCGGATTTGCATAGACATGATTCTCTTGGCACTCTCTCTATAACAAGCTGGTACTCTTCCTCTTTGCCTTTTGCACTACACTTGTTTGCCAATCTTCATTCTCTAAGTCTCTATGATTGTCCACTGCTTGAGTCATTTCCCGAGGGGGGTTTGCCTTCAAGCCTACGCAAACTAGAAATTGAGGATTGCGCCAAGCTAGTTGCTTCTAGGGAGGAATGGGGATTGTTCAAACTCCATTCTCTCATAGAGTTAAGAGTTAGTGATGACTTGGAAAACGTGGAGTCTTTCCCAGAGGATAGGTTGCTACCACCCACTCTCAGTGTGCTCCACTTAATTGGATGTTCAAAGCTAACAACAACAAACTATAAGGGTTTTCTCCATCTCAAATCTCTCAAATCCTTCTATATTATCAGTTGCCCTCGTCTTCAATCTTTGCCAGAAGCAGCTTTATCCAACTCTCTTTCTGTTCTCCTTATTCAGGATTGCCCTTTACTTAAGCAGCGTTACCAAAAGGATGGAGAGTATTGGCATAAAATTCACCACATCCCTTCTGTTATGATATATTAG 3507 0.3989 MATELIGGAFLSAALQVIFDRLASRDVKDYFHGRKLKDKMLKKLGIVLNSINQVLEDAEERQYKSPNVMKWLDQLKEAIYEAELLLDEVANEASRQKLEAEFDPATSKVRGFFRAFANPFDREIASRVEELLENIQFLAKQKDMLGLRKIICAENEVGVSWKQSNQLPTTSLVDESRICGREEDKEEIIKILLSDNVTCNQVPVISIVGMGGMGKTTLTQLVYNEQRVLDQFDLKAWVYVSQYFDVVAVTKAILKALGSKAAEEKDLNLLQLELKERLMGKRFLLVLDDVWNENYSSWGALQIPFIYGSSGSRILITTRNEKVALVMNSSQLYHLKPLEKEDCWRLFSNLAFHDKDATKYPNLVSVGSKIVDKCGGLPLALKTLGNILRVKFSQHEWVKILESDMWHLSDNDGDINPALRLSYHNLPSYLKRCFAYCSIFPKDYEFDRDQLIQLWMAEGLLNCCQINKSEEELGSELFNDLVARSFFQQTRNRASRFTMHDLLNGLAKSVSGEFCLQISANLEKNITRRTRHISLSHKINIDDQLLEHISKCNRLRCLVAFKWEFGRGGLINSNKQRVLFSTLKYLRVLSFHNCLLTELVDDIGNLKLLRYLDLSYTKIKRLPDSICRLHNLQTLLLFWCYHLEELPVDLHKLVALRHLDLSMSGINKMPNHIGRLKHLQTLTSFFIRKNDVKELGNLSNLQGTLSIFRLENVTDPADAMEANLKDKRHLDGLVLNWGDKFGRCNENEDSIIERQVLEALQPNENLKKLSVLRYDGTSFPSWFGGSHLHNLGSIALTESKFCFVLPPFGQLPSLKELSISCFHGIEVIGPEFCGNDSSNIPFRSLEILKFEEMSAWKEWCSFEGHGEEGQGLSCLKELSVRRCPWLRRALPQHLPSLQKLVICECQYLEDSVPKAASIHEIKLHLCEKLFLKDLPSSLKKATIQGTCIIESCLQQILVNNAFLEELKIHDFHGPNKKWSSSDLHRHDSLGTLSITSWYSSSLPFALHLFANLHSLSLYDCPLLESFPEGGLPSSLRKLEIEDCAKLVASREEWGLFKLHSLIELRVSDDLENVESFPEDRLLPPTLSVLHLIGCSKLTTTNYKGFLHLKSLKSFYIISCPRLQSLPEAALSNSLSVLLIQDCPLLKQRYQKDGEYWHKIHHIPSVMIY* 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00413 1168 SMART LRR_typ_2 653 676 IPR003591 -
Phac5g00413 1168 SMART LRR_typ_2 606 629 IPR003591 -
Phac5g00413 1168 PANTHER DISEASE RESISTANCE PROTEIN RP 59 860 IPR044974 GO:0006952
Phac5g00413 1168 Pfam Rx N-terminal domain 10 102 IPR041118 -
Phac5g00413 1168 Gene3D - 161 333 IPR027417 -
Phac5g00413 1168 FunFam Probable disease resistance protein At1g63360 423 509 - -
Phac5g00413 1168 Pfam NB-ARC domain 181 403 IPR002182 GO:0043531
Phac5g00413 1168 Coils Coil 41 61 - -
Phac5g00413 1168 Coils Coil 72 92 - -
Phac5g00413 1168 Gene3D - 429 508 IPR036388 -
Phac5g00413 1168 Gene3D - 337 427 IPR042197 -
Phac5g00413 1168 FunFam Probable disease resistance protein At1g61300 161 331 - -
Phac5g00413 1168 SUPERFAMILY L domain-like 936 1160 - -
Phac5g00413 1168 PRINTS Disease resistance protein signature 277 291 - -
Phac5g00413 1168 PRINTS Disease resistance protein signature 204 219 - -
Phac5g00413 1168 PRINTS Disease resistance protein signature 374 388 - -
Phac5g00413 1168 PRINTS Disease resistance protein signature 604 620 - -
Phac5g00413 1168 Gene3D Ribonuclease Inhibitor 975 1157 IPR032675 -
Phac5g00413 1168 SUPERFAMILY L domain-like 499 910 - -
Phac5g00413 1168 Gene3D - 13 129 - -
Phac5g00413 1168 Gene3D Ribonuclease Inhibitor 567 942 IPR032675 -
Phac5g00413 1168 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 437 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00413 Phac-Chr5 3336020 3340505 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00413 205 385 WRKY Transcription Factor Family AT5G45050 31.088 3.07e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00413 - - gmx:100777510 1939.08