Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00409 ATGAAACACAATGAAAAGATTCTCATGCTAATGATTTACACCACTTTCTTTTGTTTCATGCCCTCTTTCTCTCATCAAGATACTGTTACTATTACCCCAAATCACTCCATACAGTATCATGATACCCTTGTTTCTTCAGCAGGAACCTTTGAAGCAGGATTTTTTGACCTTGGAAACTCAAAAAGACAATATTTTGGTATATGGTACAAGAGCATATCACCTAGGACTATTGTGTGGGTTGCCAACAGGAATGACCCAGTACAAAACTCAACAGCAGTTCTCAAACTTACTCATCAAGGAGATCTTGTCATTCTTGATGGCTCCAGAGGCAGAGTGTGGTCCTCCTCCAACTCATCAAAAACTGCAGTGAAACCAGTTATGCAGCTTTTAGATTCAGGAAACCTTGTTGTGAGAGATGGAGAGAGCTCAGAGAATCTCTTGTGGCAAAGCTTTGATTATCCTGGAGACACTTTCCTTGCAGGAATGAAACTGAGAAGCGATTTTGTTACTGGTCCATGTCAGTATCTCACGTCTTGGAGGGACTATGAAGATCCAGCTGAAGGTGAGTTTTCTTATAAGATCGATACAAGGGGCTTTCCTCAACAAGTTACTACAACCGGAACCAATATTTCCTACAGCACAGGGCCTTGGAATGGCTATCTTTTCAGTGGAGTTTCTTGGGACAGAATGCACAGATTCTTGAATTTCTCTTTGGAGTTCACTGACAAAGGGGTTTCTTATGGATATGAAACGTTGAACAGTTCAGTGCTTACTATAACAATGCTCAAGCTCAATCCAACAGGGGGTACAGAGCGGTCTCTATGGTCAAACAAAAGACAAAGTTGGGATATTGTAAACACTCATCCAACAGACCAGTGTGAATATTTTGCAGCTTGTGGTGTCAACACTATCTGCAACAGTAATGATCTTCCAATATGTGAATGCTTGCAAGGTTTCACATCAAAGTTTCAGGCAAAGTGGGATCCCCATGATTGGTCTGGTGGTTGTGTGAGAAGAACAGAATTAAGTTGTGATAATGGAGATTGGTTTAAGAAGTACACAGGAATAAAGCTGCCAGAAACGTCTTCTTCCTGGTTTGACAGGAGCTTGAGCCTTGAGGAATGTGAGACATTGTGCTTGAGAAACTGCTCTTGTACTGCATATGCAAATTCAGATATTAGAGATGGTGGGAGTGGTTGTTTGCTTTGGTTCCATGACATTGTGGACATGAGAACTCACACTAATCGAGGACAAGAAATTCATATACGACTGCCATTCTCTGAACATGATCAAAGAAGGAATAAGAGGTACCTAAATCGAAAGAGGCTTGCAGGGATTGTAGTAGGACTTGTTGCATTCATAATTGGACTAACAATTCTTTTGTGGGCGACTTCAAAGCGTGTAAAAGGGATGAAGCTACCCAAGCCAGCAATTCATGTCATATTGGGAGTAGTGAAAAAAGCTATTTCGTGGAAGCACATGATGGAGAAGGAAGAGGACAGCTTACCAACAATATTCGATTTTTCAACCATTGATGTTGCCACAAATCATTTTTCTAACAGAAACAAGTTAGGAGAAGGTGGCTTTGGAACAGTACACAAGGGCACATTGATAGATGGACAAGAGATTGCAGTTAAGAGGCTTTCAAAAACTTCTAGACAAGGAACTGAGGAGTTCAAAAATGAAGTGAAGTTGATGGCAACACTTCAGCACCGTAATCTTGTAAAACTTCTTGGTTGTTCTATTCAACAAGATGAGAAGTTGTTGATCTATGAATTCATGCCCAACAGAAGCTTGGATTACTTTATTTTTGATACAATGCAAGGCAAATTACTAGATTGGACCAAGCGCTTGGAAATTATCGAGGGAATTGCTCGAGGTCTTATGTATCTTCATCAAGATTCTAGACTTAGAATAATACACAGAGATATCAAAACAAGTAACATTCTTCTTGATAACGATATGATTCCAAAGATATCAGATTTTGGATTAGCAAGAATATTTGGAGGAGATGAAGCTGAAGCAAAAACAAACAGAGTGATGGGAACATATGGCTATATGCCTCCAGAATATGCAGTGCATGGTTCTTTCTCAACCAAATCTGATGTTTTCAGTTTTGGTGTAATTGTTATTGAGATAATTAGTGGGAGGAAGAACCGTGGATTTCGTGACCCTCACCATCATCTTCTCAACCTTCTAGGCCATGCATGGAGATTATGGATTGAAGAAAGGCCATTGGAGTTAATAGATGACATATTAGAAGATGGTGCAGCCTTATCTGTAGAAATACTACGGTGTATTCAAGTGGGTCTGTTGTGTGTACAACAGAATCCAGAAAATAGGCCTAACATGTCATCTGTTGTATTGATGTTAAATGGCGAGAAGTTACTACCAAAACCAAGCCAACCTGGATTCTATATAGGTAAAGATAATAAAGCTGACACTGGATCTTCAAAGCAATATGAAATTTGTTCAGTAAATGAAGTTTCAATGTCATCCTTAGGGGCAAGATAG 2514 0.3966 MKHNEKILMLMIYTTFFCFMPSFSHQDTVTITPNHSIQYHDTLVSSAGTFEAGFFDLGNSKRQYFGIWYKSISPRTIVWVANRNDPVQNSTAVLKLTHQGDLVILDGSRGRVWSSSNSSKTAVKPVMQLLDSGNLVVRDGESSENLLWQSFDYPGDTFLAGMKLRSDFVTGPCQYLTSWRDYEDPAEGEFSYKIDTRGFPQQVTTTGTNISYSTGPWNGYLFSGVSWDRMHRFLNFSLEFTDKGVSYGYETLNSSVLTITMLKLNPTGGTERSLWSNKRQSWDIVNTHPTDQCEYFAACGVNTICNSNDLPICECLQGFTSKFQAKWDPHDWSGGCVRRTELSCDNGDWFKKYTGIKLPETSSSWFDRSLSLEECETLCLRNCSCTAYANSDIRDGGSGCLLWFHDIVDMRTHTNRGQEIHIRLPFSEHDQRRNKRYLNRKRLAGIVVGLVAFIIGLTILLWATSKRVKGMKLPKPAIHVILGVVKKAISWKHMMEKEEDSLPTIFDFSTIDVATNHFSNRNKLGEGGFGTVHKGTLIDGQEIAVKRLSKTSRQGTEEFKNEVKLMATLQHRNLVKLLGCSIQQDEKLLIYEFMPNRSLDYFIFDTMQGKLLDWTKRLEIIEGIARGLMYLHQDSRLRIIHRDIKTSNILLDNDMIPKISDFGLARIFGGDEAEAKTNRVMGTYGYMPPEYAVHGSFSTKSDVFSFGVIVIEIISGRKNRGFRDPHHHLLNLLGHAWRLWIEERPLELIDDILEDGAALSVEILRCIQVGLLCVQQNPENRPNMSSVVLMLNGEKLLPKPSQPGFYIGKDNKADTGSSKQYEICSVNEVSMSSLGAR* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00409 837 CDD PAN_AP_plant 340 425 - -
Phac5g00409 837 Gene3D Phosphorylase Kinase; domain 1 491 593 - -
Phac5g00409 837 Pfam D-mannose binding lectin 76 180 IPR001480 -
Phac5g00409 837 PIRSF SRK 2 837 IPR024171 GO:0004674
Phac5g00409 837 Pfam Protein tyrosine and serine/threonine kinase 521 788 IPR001245 GO:0004672|GO:0006468
Phac5g00409 837 ProSiteProfiles Bulb-type lectin domain profile. 28 150 IPR001480 -
Phac5g00409 837 Pfam PAN-like domain 344 410 IPR003609 -
Phac5g00409 837 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 782 - -
Phac5g00409 837 Pfam Domain of unknown function (DUF3403) 797 837 IPR021820 GO:0004674
Phac5g00409 837 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 484 593 - -
Phac5g00409 837 SMART blect_4 34 154 IPR001480 -
Phac5g00409 837 ProSiteProfiles Protein kinase domain profile. 518 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g00409 837 Gene3D - 22 151 IPR036426 -
Phac5g00409 837 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 594 799 - -
Phac5g00409 837 SUPERFAMILY Protein kinase-like (PK-like) 499 791 IPR011009 -
Phac5g00409 837 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524
Phac5g00409 837 ProSiteProfiles PAN/Apple domain profile. 344 425 IPR003609 -
Phac5g00409 837 SMART ntp_6 345 424 IPR003609 -
Phac5g00409 837 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 185 IPR036426 -
Phac5g00409 837 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 343 424 - -
Phac5g00409 837 CDD B_lectin 42 154 IPR001480 -
Phac5g00409 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Phac5g00409 837 CDD STKc_IRAK 524 793 - -
Phac5g00409 837 Pfam S-locus glycoprotein domain 212 322 IPR000858 GO:0048544
Phac5g00409 837 Gene3D Transferase(Phosphotransferase) domain 1 594 798 - -
Phac5g00409 837 SMART serkin_6 518 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g00409 837 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00409 Phac-Chr5 3310375 3313881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00409 444 806 Receptor kinase-like Gene Family AT4G23190 51.206 4.04e-120 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac5g00409 PK_Tyr_Ser-Thr 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00409 - - pvu:PHAVU_005G030900g 1300.42