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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Phac5g00405
ATGGAAGTGGTGGAAAAGAGAAATTTTTCTAAACTGTTGTCGGAGCTGATAGTTTTAGCCGATGAGGTTGCTTCTCTTGCTAAGAACTCTGAAATTGAGGTACATATTTTTGCTGAGTTTGCCATGTTGGTTGAGAAATTCTCACCAATTTTCAATGACTTGAGAGACGAAAACGCAGTCTTGGACAAGCCACCTATAAGAAAATCCTTGGAATCTCTTGAGAGTGAGCTGAGGCGTGCCAAGGCTTTGACAAAAAGCTCGAATTTGAGGCAGCCAATCAAGCAAATTGAGGACATAACACATGACATAGGTCGATCCTTTGGCCTTCTGCTCGTGGCCAGCCTAGAAATTTCCATGGATTTCAGAGAAAAGATTGGCACATTGCAAAGACAATTGATGAATGTGAGATTTGATGGCAGTTCAAGTGTGGCTTCAAGTCCAAAATCAGAGGTTTCAGGCAGTGAAGTGAAGCTGAGTGGAGAAATAGAAGAGGAAGTAGTTAACGTTTCTATTGATGATGTTGTTTTGCAACTTAAGAATGGCAATGATGAAGAATTTGCAGTTTCACTTTTGAGACTGAAGGAGTTCATAAGGTGTGAAAGACTTGATGGTGGCTTGATTAACGAGGAAGCAACTCTTGCCATTCTTTTCAACCGTCTAGGTTCATGTAAGGCAGACAATAGGTTGGCAATCATGCGATTGCTAAGAAGTATTGCTTTAGGAAATGATGAGAAAAAGGAGAAGATGGTAGATATTGAGTTCTTATCAGCAGTGGTGAAGTCACTGACAAGAGATTCAGAGGAGAGGAAGGAAGCAGTAGGGCTGTTGCTAGAGCTCTCTGACATTCAGGCCGTTCGCCGGCGAATTGGAAGAATTCAAGGATGTATTGTTATGTTAGTTTCTATACTTAATGGGGATGACCCTGATGCCTCACATGATGCAGCAAAGTTATTGAATATATTGTCTAGTAATACTCAAAATGCACTTCATATGGCTGAGGCTGGCTACTTTAGGCCACTTGTGCAGTATTTGAAAGAAGGGTCTGACATGAACAAGATCCTAATGGCGACAGCACTTTCAAGGTTGGAACTCCCTGATCACAGCAAACTTTCCCTTGGAGAAGATGGGGCAATTGAGCCACTTGTCAATATGTTCATTACTGGGAAACTTGAGTCCAAGTTATCAGCTCTAAACGCGCTACAAAATCTGTCAACCAAGGCAGAAAACGTGCAGCGTCTGATCAGATCAGGAATTGCAGGATCTCTGCTACAACTTCTTTTCTCTGTCACATCTGTCCTCATGACCTTGCGTGAGCCTGCATCAGCCATTCTTGCAAGAATTGCTCAGTCCGAATCCATCCTTGTCAATGAAGATGTGGCTCAGCAGATGCTTTCCCTTTTGAATCTTTCCAGCCCTATAATCCAGGGCCATTTATTAGAAGCTCTAAATAACATAGCCTCTCACCCTGGTGCATCCAGAGTGAGAAGCAAAATGAAGGAAAAAGGTGCACTTCAACTCCTCTTACCCTTTATGAAGGAAAACACCACCAAAGTCAGGAGTAAGGTCTTGCATTTGTTGTACACTCTCTCTAAAGATCTAACAGATGAGTTAACTGAACATCTTGATGAAACTCACCTCTTAAACATAGTTAACATAGTCTCAACATCAACATCAGACACTGAAAGGGCTGCAGCTGTTGGCATACTCAGTAATCTTCCTGCTAGTAACAAAAAGGTGACTGATATACTGCAGAGAGCAAATTTGCTGCCCATTTTGATATCCATCATGTATACTATCACAGGAAGTAACTCATCCACAACAAATACCTTAGCAGAGAGTATTGCCAGTGTTATCATTCGCTTCACAAATTCCTCTGACAAAAAACTGCAACTTCTCTCAGCTGAACAAGGGGTGATTCCTTTGCTTGTAAAACTGCTCTCAACCGGTTCACCAATCACAAAAGCAAGGGCTGCAGCCTCACTTGCACAACTATCTCAGAATTCTCTGTCTCTTAGAAAGTCTAGAAAGTCAAGGTGGTTGTGTGTTCCTCCCTCAGTGAATGCATACTGTGAGGTCCATGATGGATATTGCTTTGTCAACAGCACTTTTTGTTTGGTCAAAGCAGGTGCTGTTTCTCCCCTCATCCAACTATTGGAAGATTCTGAGAGACAAGCAGTTGAAGCTGCTTTGCATGCTCTTTCAACTCTTCTGCAAGATGAAATCTGGGAAGGTGGTGTCAGTTCCATTGCCAAGTTATCAGGTGTGCAACCTATTATAAAGAGTCTAGAAGTTGGTGATGCAAAGGTTCAAGAAAAAGCAATATGGATGTTGGAGAGAATATTCAAAGTTGCAGAACATAGAGTCAAATATGGAGAATCTGCTCAGGTGGTTCTTATTGATCTTGCCCAGAAGAGTGATTCTAGATTGAAGTCAACAGTTGCAAAAGTATTGGCTGAGCTTGAGCTCTTGCAATCTCAATCAAGTTACTTTTGA
2493
0.4184
MEVVEKRNFSKLLSELIVLADEVASLAKNSEIEVHIFAEFAMLVEKFSPIFNDLRDENAVLDKPPIRKSLESLESELRRAKALTKSSNLRQPIKQIEDITHDIGRSFGLLLVASLEISMDFREKIGTLQRQLMNVRFDGSSSVASSPKSEVSGSEVKLSGEIEEEVVNVSIDDVVLQLKNGNDEEFAVSLLRLKEFIRCERLDGGLINEEATLAILFNRLGSCKADNRLAIMRLLRSIALGNDEKKEKMVDIEFLSAVVKSLTRDSEERKEAVGLLLELSDIQAVRRRIGRIQGCIVMLVSILNGDDPDASHDAAKLLNILSSNTQNALHMAEAGYFRPLVQYLKEGSDMNKILMATALSRLELPDHSKLSLGEDGAIEPLVNMFITGKLESKLSALNALQNLSTKAENVQRLIRSGIAGSLLQLLFSVTSVLMTLREPASAILARIAQSESILVNEDVAQQMLSLLNLSSPIIQGHLLEALNNIASHPGASRVRSKMKEKGALQLLLPFMKENTTKVRSKVLHLLYTLSKDLTDELTEHLDETHLLNIVNIVSTSTSDTERAAAVGILSNLPASNKKVTDILQRANLLPILISIMYTITGSNSSTTNTLAESIASVIIRFTNSSDKKLQLLSAEQGVIPLLVKLLSTGSPITKARAAASLAQLSQNSLSLRKSRKSRWLCVPPSVNAYCEVHDGYCFVNSTFCLVKAGAVSPLIQLLEDSERQAVEAALHALSTLLQDEIWEGGVSSIAKLSGVQPIIKSLEVGDAKVQEKAIWMLERIFKVAEHRVKYGESAQVVLIDLAQKSDSRLKSTVAKVLAELELLQSQSSYF*
831
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Phac5g00405
830
PANTHER
RING-TYPE E3 UBIQUITIN TRANSFERASE
175
830
-
-
Phac5g00405
830
ProSiteProfiles
Armadillo/plakoglobin ARM repeat profile.
376
418
IPR000225
GO:0005515
Phac5g00405
830
SUPERFAMILY
ARM repeat
372
784
IPR016024
-
Phac5g00405
830
SUPERFAMILY
ARM repeat
165
488
IPR016024
-
Phac5g00405
830
SMART
arm_5
698
738
IPR000225
GO:0005515
Phac5g00405
830
SMART
arm_5
365
405
IPR000225
GO:0005515
Phac5g00405
830
SMART
arm_5
324
364
IPR000225
GO:0005515
Phac5g00405
830
SMART
arm_5
626
666
IPR000225
GO:0005515
Phac5g00405
830
SMART
arm_5
242
281
IPR000225
GO:0005515
Phac5g00405
830
SMART
arm_5
406
449
IPR000225
GO:0005515
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Phac5g00405
Phac-Chr5
3294988
3299989
Dispersed/Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Phac5g00405
215
830
U-box Gene Family
AT1G76390
29.439
1.32e-48
183
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Phac5g00405
K08332
-
gmx:100791453
1346.64
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