Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00400 ATGAGGTATACAAAAGAAAAGGTGAAAAGTTGGAGGCTGGCTCTGCATGAAGCTGCCAATCTTGTAGGGTGGCGTCATAAAGATGGATGTGGATATGAATATGAACTTATCAGAGAGATTGTTGACAAGGTGGGCATATCAAAAGGAAAGCTTTTAACTGTTGATAAAATTCTTGTTGGAGTGGAGTTTCGTATACCCCAAATAGAATTCCGTTTGCAAATCTCTGATCCCTCTGTTCGCATGATGGGAATATGTGGAGTTGGTGGAATAGGCAAAACCACTCTAGCTCAAGTTTTGTATAATTACATCAGCCAACAATTTGAAGGTTCATGCTTTCTCAATGATGTCAGAGGAAATTCAGCAAAATATGGGTTAGCATATCTGCAAGAGGCAATTATTTCTGATATAGCTGGTGACAGTACCAAGGTGGTTAATGAGAACCAAGGAATTCCAATCCTTATTAGGAAGTTGCAAGGCAAAAGGGTTCTTCTGATACTTGATAATGTGGACAAGCTGGAGCAGTTGGAGTATTTGGCAGGAGAATGCAATTGGTTTGGTTTGGGAAGTAGAATTGTCATAACTAGCAGGTGTAAAGATGTTCTAGCTGCTCATGGAGTTGAAAATGTATATGATGTACCTAAATTAGATAATTATGAAGCAATTCAACTTCTATGTTCCAAGGTAACCGTGGGACCTGTACCTGATTATTACTATGGGGTTTGGAAACATGCAGTTGACTGTTCCAAGGGCCTTCCATTGGCTTTGAAGTATATTGGTTCTCATTTGTTAGAAAAAATGAAGGCTGTTGATTGTAATTTGTCAGAAACATCAATTGAGGAATTGAAGATTGCGGTAGAAAGATATGTAGATGGAGGAGAAATTCAAAGTATACATAAAGTGAGTTATGATAGTTTGAATGAATGTGAGAAGAGAATTTTCCTTGACATTGCATGTTTCTTCAGTGGAGAGTCCTTATCATATGTTGAGGAAATACTATCAGCTTGTGGTTTCGATCCAAAATATAGTATTACCAGACTAACTGATAGATCTCTCCTATCTATCACTCCCGGTGGAAGCTTGATGATGCATGACAATATCAAAGACATGGCCATGAAAATAGTGCAACAGGAATCACCCCTGCATCCAGGAAAACGAAGTAGATTATGGTGCCCTCAAGATGTTCTTCAAGTTTTAAATGAAAATCAGGGAACGGATCAAATTGAAGTTATGATGTTGGTTGACTTGCCACAAGGAAATGAGGTACTGAAGTTGAGTGATAAAGCCTTCAAAGATATGAAAAACCTGAGAATATTAATTATTAAGGATGCCATATATTCTGGAGTCCCCCATTATCTCTCAAATAGCTTGAGAGTCTTGATATGGAGTGGATATCCTTCAGACTGTTTACCACTTGATTTTCTCAACTTGCCTTCTGATTGTCTCATTTTGAACAATTTCAAGAATATGGAGTGTCTGACTAAATTGGATTTCACTGACTGTGAATTTTTGACAGAAGTACCTGACATTTCAGGAATCTCTGACTTGAGGACATTGCATCTAGATAATTGCATAAATTTGATCAAGATTCATGATTCTGTTGGATTTCTTGGTAATCTTGAAGTGCTAACTGCAGCTAGATGCACTGGTCTAGAATTAATTCCATTAACATTCAAGTTGGCCTCTCTAAGAGAGCTCTCTTTCTCTGAGTGCTTGAGACTTGTAAGGTTTCCAGAAATATTGTGTGAGATAGAAAATTTGCATTATCTCAACATGTGGCAAACTGCAATAGAGGAACTACCATTTTCTATTGGAAATCTTAGAGGACTTGAATCTTTAAATCTAATGGAATGTGCTAGGCTTGATAAACTACCCAGTAGCCTTTTTACACTTCCAAGACTGACAGAAATTCAAGCTGACTCTTGTAGAAGGTTTGATATTTCTGTTGAGTGTGAAAATCAAGCACAACAGAAATTAACAGCATCTTTAAACTATGTTTATCTGTATCTGAGCTCTTGCAACTTAACAACTGAACACCTTGTTACATGTCTCAGTGGTTTTGCAAGTGTGGTATATTTGGACATATCTTACAATAATTTTACAGCCCTTCCAGCATGCATTAAGGAATGTGTTCATTTGAAGACTATTCTACTAAGCAATTGCAAGCAGCTTCAAGACATTTTAGTCATACCTCCTAAATTAGAACATATAGATGCATTGAACTGCACATCATTGACATCCCAGTCATCAAGTGTACTATTGAACCAGGCATTCCATGCAACTGGGGAAAAAACTGTAATTCTTCCAGGTTCAAGGATTCCAGAATGGTTTGATTATTTTAGCAGTGAAAGATCCATAACCTTTTGGGGGCGTGGGAGATTCCCAAGCATTTGTGTGTGTGTTTCTTTTGGAATGTTGGAAACTCCACTGCACCATTTTGGAGTTGGATTAAGGATAGTGATCAACGGCTACAAAAGGATACTGTCTCAACGTTGCTACAATTGGCCAATTGAGACAGATCATGTGTGGCTATTTGACCTAACTGCAGTTGTTAATCATAAAGATCTGGTTGGAACATTTGTGAAGAGTGATTGGAATAGTGTGGAGATTGAAATGGAAAGGAATGGTTGTATAATGGATGAGCATGGGCCAACAAGAACAATGGGTATTGTGAAATGCTATGGAATTCACGTATATAGGCAAGAAAGTAAAATGGAGGATATTTCATTCACAAAACCTAAAAAGCTACAAGAAAATAGTACAAGGAAAAGGAGATTTTGGATTCCATGA 2787 0.3757 MRYTKEKVKSWRLALHEAANLVGWRHKDGCGYEYELIREIVDKVGISKGKLLTVDKILVGVEFRIPQIEFRLQISDPSVRMMGICGVGGIGKTTLAQVLYNYISQQFEGSCFLNDVRGNSAKYGLAYLQEAIISDIAGDSTKVVNENQGIPILIRKLQGKRVLLILDNVDKLEQLEYLAGECNWFGLGSRIVITSRCKDVLAAHGVENVYDVPKLDNYEAIQLLCSKVTVGPVPDYYYGVWKHAVDCSKGLPLALKYIGSHLLEKMKAVDCNLSETSIEELKIAVERYVDGGEIQSIHKVSYDSLNECEKRIFLDIACFFSGESLSYVEEILSACGFDPKYSITRLTDRSLLSITPGGSLMMHDNIKDMAMKIVQQESPLHPGKRSRLWCPQDVLQVLNENQGTDQIEVMMLVDLPQGNEVLKLSDKAFKDMKNLRILIIKDAIYSGVPHYLSNSLRVLIWSGYPSDCLPLDFLNLPSDCLILNNFKNMECLTKLDFTDCEFLTEVPDISGISDLRTLHLDNCINLIKIHDSVGFLGNLEVLTAARCTGLELIPLTFKLASLRELSFSECLRLVRFPEILCEIENLHYLNMWQTAIEELPFSIGNLRGLESLNLMECARLDKLPSSLFTLPRLTEIQADSCRRFDISVECENQAQQKLTASLNYVYLYLSSCNLTTEHLVTCLSGFASVVYLDISYNNFTALPACIKECVHLKTILLSNCKQLQDILVIPPKLEHIDALNCTSLTSQSSSVLLNQAFHATGEKTVILPGSRIPEWFDYFSSERSITFWGRGRFPSICVCVSFGMLETPLHHFGVGLRIVINGYKRILSQRCYNWPIETDHVWLFDLTAVVNHKDLVGTFVKSDWNSVEIEMERNGCIMDEHGPTRTMGIVKCYGIHVYRQESKMEDISFTKPKKLQENSTRKRRFWIP* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00400 928 SUPERFAMILY L domain-like 363 749 - -
Phac5g00400 928 Gene3D Ribonuclease Inhibitor 408 574 IPR032675 -
Phac5g00400 928 Gene3D Ribonuclease Inhibitor 575 758 IPR032675 -
Phac5g00400 928 Gene3D - 1 49 IPR035897 -
Phac5g00400 928 Pfam NB-ARC domain 72 283 IPR002182 GO:0043531
Phac5g00400 928 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 316 IPR027417 -
Phac5g00400 928 PRINTS Disease resistance protein signature 156 170 - -
Phac5g00400 928 PRINTS Disease resistance protein signature 604 620 - -
Phac5g00400 928 PRINTS Disease resistance protein signature 248 262 - -
Phac5g00400 928 PRINTS Disease resistance protein signature 81 96 - -
Phac5g00400 928 Gene3D - 214 306 IPR042197 -
Phac5g00400 928 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 641 IPR044974 GO:0006952
Phac5g00400 928 Gene3D - 50 208 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00400 Phac-Chr5 3246302 3250404 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00400 3 752 WRKY Transcription Factor Family AT4G12020 30.000 1.92e-68 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00400 - - gmx:100796191 1462.97