Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac5g00359 | ATGCCACCCTCCTTCATCACACATCACCACTCTCTTCATCATCCTTTTATCTTCTTCTTCTTCTCTTATTCTTCTCCTGTTTTGGCCTGCAATTGCCACATCGTTATCATAATCATGGGTATGGCTGCAGAGGCACAGTTTCATGTTTTGGCTGTTGATGACAGTGTTATTGACAGAATGTTGATTGAGAGGCTCCTCAAAACCTCTTCTTTTCATGTCACTGCGGTGGATTCTGGGAGTAAGGCTTTGAGGTTTCTTGGTTTGGTTGAAGATGAGAAGAGAACTGAAGAACCTCCCACTATTTCTCTAGAAGCCAATCAGGATGTAGAAGTAAACCTGATCATAACTGATTACTGTATGCCAGAAATGACAGGGTATGATCTGCTGAGAAAAATCAAGGAATCTAAATCTCTTAAAGACATACCAGTGGTGATTATGTCCTCAGAGAATGTTCCATCAAGGATCAACAGATGCCTAGAAGATGGAGCTGATGAATTCTTTTTGAAACCAGTTCAACAGTCAGATGTAAACAGGCTCAGACCCCATTTGTTGAAATCAAAAGTTAAGGATGAAGAAGAGCAACAAATCAGTAATAAAAGGAAGGAAACAGAAGAAAGGCATTCCCCAGAGAAAACCAGGACAAAAATGGAGCCTCAAAAAGTGGTTAATTCCAGTTAA | 678 | 0.4027 | MPPSFITHHHSLHHPFIFFFFSYSSPVLACNCHIVIIIMGMAAEAQFHVLAVDDSVIDRMLIERLLKTSSFHVTAVDSGSKALRFLGLVEDEKRTEEPPTISLEANQDVEVNLIITDYCMPEMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEDGADEFFLKPVQQSDVNRLRPHLLKSKVKDEEEQQISNKRKETEERHSPEKTRTKMEPQKVVNSS* | 226 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac5g00359 | 225 | CDD | REC_typeA_ARR | 49 | 179 | - | - | |
Phac5g00359 | 225 | SMART | REC_2 | 47 | 183 | IPR001789 | GO:0000160 | |
Phac5g00359 | 225 | Pfam | Response regulator receiver domain | 49 | 176 | IPR001789 | GO:0000160 | |
Phac5g00359 | 225 | MobiDBLite | consensus disorder prediction | 180 | 217 | - | - | |
Phac5g00359 | 225 | Gene3D | - | 48 | 222 | - | - | |
Phac5g00359 | 225 | SUPERFAMILY | CheY-like | 47 | 187 | IPR011006 | - | |
Phac5g00359 | 225 | ProSiteProfiles | Response regulatory domain profile. | 48 | 184 | IPR001789 | GO:0000160 | |
Phac5g00359 | 225 | MobiDBLite | consensus disorder prediction | 179 | 225 | - | - | |
Phac5g00359 | 225 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 47 | 213 | IPR045279 | GO:0009736 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac5g00359 | Phac-Chr5 | 2974501 | 2976370 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac5g00359 | 39 | 201 | Response Regulator Gene Family | AT3G57040 | 63.636 | 2.56e-70 | 213 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Phac5g00359 | Response_reg | 4.8e-19 | CL0304 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac5g00359 | K14492 | - | gmx:100818762 | 294.278 |