Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00353 ATGAGCATGTTAGGCCTGAGAGACCTAGTTCTCATAGCTCAAACCCCTTCCCTGCACCAGCACCAGCACCAGCACCAACACCAAGGCCAACAACAACCCATCTCAGAGAACCAAACTCCCAACCTTCCTCTGCCTTCTTCAGCCGCTCTCAGTGTTGGCTTTGGCATTTTCCCTCTCCTCACTGCCACACCCTGTGTGCCACACCCCCACCAAACCAATGAGATTCAAGAGTGTGCTGGCGGCGGCGGTGGTGCCACCACCACCAACTACTGGAACCTCAAGATGTGCCCAGAAGTGAATCCTCCGAAGAAGGGTGTGATGAACATGGATGATGATGATGATGAAGACGATGAGAGACATCATCACCATAAGGGTGTGATGGAGAGTGAGGAAAACGGGATTTATGGACCTGACTTCAGGGTGTGTCAAGATTGCGGCAACAGGGCCAAAAAAGATTGCATCTTTAGAAGATGCAGAACTTGCTGCAAGGGACGTGGATACGATTGCAACACTCACGTGAAGAGCACATGGATCCCCTCAATCCGCCGCCGGGAGCGGGACATGGTGGTGGCTTCCTCCGGTGGCGGTGGCAGTAAGAGGCCAAGAGCTATAGTGGGGTCATCCCAAAATGCCACTGCCACTTCTCACAGTTCCAACTCCAACGCCACAACACCCAAGAGCTTAACTACAATCTCTTCTCACCAAGATGGGAGGTTGAAGGAGAGTTTACCAGGGCATGTTCGTGCACCTGCAGTGTTCAAGTGTCACAGAGTCTCTGCCATTGGGAATGGTGAAGATGAGTTTGCGTACTTGGCAACGGTGCAGATCAGTGGTCATGTGTTCAAGGGGTTTCTGTATGACCATGGAGTTGATGGGAAAATTGGAAATGCAGTGCCTTGTGTTTCGGAACTGCAACTGGGAAACAATTGCAGTGGGAAGAACAGAGAATGTTCTTCTGCAATTGGACTTCCAAATAACACTGCATACCCTGCTTCTGCCACCTGA 1005 0.5124 MSMLGLRDLVLIAQTPSLHQHQHQHQHQGQQQPISENQTPNLPLPSSAALSVGFGIFPLLTATPCVPHPHQTNEIQECAGGGGGATTTNYWNLKMCPEVNPPKKGVMNMDDDDDEDDERHHHHKGVMESEENGIYGPDFRVCQDCGNRAKKDCIFRRCRTCCKGRGYDCNTHVKSTWIPSIRRRERDMVVASSGGGGSKRPRAIVGSSQNATATSHSSNSNATTPKSLTTISSHQDGRLKESLPGHVRAPAVFKCHRVSAIGNGEDEFAYLATVQISGHVFKGFLYDHGVDGKIGNAVPCVSELQLGNNCSGKNRECSSAIGLPNNTAYPASAT* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00353 334 MobiDBLite consensus disorder prediction 203 237 - -
Phac5g00353 334 MobiDBLite consensus disorder prediction 191 241 - -
Phac5g00353 334 Pfam Domain of unknown function (DUF702) 141 291 - -
Phac5g00353 334 MobiDBLite consensus disorder prediction 110 131 - -
Phac5g00353 334 MobiDBLite consensus disorder prediction 17 44 - -
Phac5g00353 334 NCBIfam putative zinc finger domain, LRP1 type 141 183 IPR006510 -
Phac5g00353 334 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 20 321 IPR007818 GO:0003700|GO:0006355
Phac5g00353 334 NCBIfam LRP1 C-terminal domain 243 290 IPR006511 -
Phac5g00353 334 MobiDBLite consensus disorder prediction 110 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00353 Phac-Chr5 2912542 2916622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00353 142 329 C2H2 Transcription Factor Family AT5G12330 53.234 2.13e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Phac5g00353 DUF702 1.6e-54 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00353 - - vun:114175485 564.688