Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00349 ATGGACACCAAGTTGTTGACAATCCGTACTCTCGTCAGCTCCCTCACTTCCTCCTCCGACCAAACCCGTCTCGCCGCCCTCCGCCACCTCCGCCGCACCTCCAACGAGGACCCCGCCGCCCGCCCCCTCATCTCCGCCGCCGGCGCCGTCCCCCTCCTCGCCGGCGCCCTCTACTCCCCCTCCCACCCCATCCAAGACCACGCCGCCGCCACTCTCCTCAACCTCTCCATCTCCGACCGCCGCCCCCTCCTCTCCTCCCCCACCCTCCTACCCGCCCTCGCCCACCTCCTATCCCGCCACGCCACATCCTCCGCCGCCTCCGCCGTCCAATCCGCCGCCGCCACCCTCCACAGCCTCCTCGCGGTGGTGGCCGAGTTCCGCCCCACCGTCGGTGCAAAACCCGAAATTCTTCATGCCCTCATCGGCATAATCAGTGATCCTGATTCGGTGACGAGGACGATAAAGGACGCTCTGAAAGCATTGTTTGGAATCGCACTCTACCCGCCGAGCCGAACTACTCTGGTCCGGCTAGGCGCAGTGCCCGTGCTCTTCGATCTGGTCGCGAAGGACAAGAACGGGACGAGAAAAGTTGGCATAATTGAGGATGCCACTGCGGTGATCGCGCAGATTGCGGCGTGCGAGGAGAGCGAGGACGCGTGTCTTAAGGTTTCGGGGGTTTCTAGGTTGGCCATGATGTTGTGTTCGGAAAATGGAAGCTGCAGTTTGAGGACAAAGGAGAATGCTGTTGCGGCGTTGTTGAATTTGGTGAGATATGGGAGTGAGAGAGTCGTTGGGGAGGTTAGGAACAAGGTTGGGGCGTTGGATGGGATCTCCTACGTGCAGGAACACGGTAGCCCCAAAGGGAAGAGCAAAGCCGTGGTCTTTTTCAAGCTTCTGCTTGATGGTGGAAGCAGTGGTGAAATTGTTCAGGATTTGTACCCTGTTGACCCTGATTCGGGTTCAAGTTGCAGGGAATAA 978 0.6012 MDTKLLTIRTLVSSLTSSSDQTRLAALRHLRRTSNEDPAARPLISAAGAVPLLAGALYSPSHPIQDHAAATLLNLSISDRRPLLSSPTLLPALAHLLSRHATSSAASAVQSAAATLHSLLAVVAEFRPTVGAKPEILHALIGIISDPDSVTRTIKDALKALFGIALYPPSRTTLVRLGAVPVLFDLVAKDKNGTRKVGIIEDATAVIAQIAACEESEDACLKVSGVSRLAMMLCSENGSCSLRTKENAVAALLNLVRYGSERVVGEVRNKVGALDGISYVQEHGSPKGKSKAVVFFKLLLDGGSSGEIVQDLYPVDPDSGSSCRE* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00349 325 Gene3D - 6 297 IPR011989 -
Phac5g00349 325 SMART arm_5 167 212 IPR000225 GO:0005515
Phac5g00349 325 SMART arm_5 213 257 IPR000225 GO:0005515
Phac5g00349 325 SMART arm_5 37 77 IPR000225 GO:0005515
Phac5g00349 325 FunFam ARM repeat superfamily protein 2 304 - -
Phac5g00349 325 PANTHER U BOX DOMAIN-CONTAINING 8 297 - -
Phac5g00349 325 SUPERFAMILY ARM repeat 7 308 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00349 Phac-Chr5 2881711 2883335 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00349 8 292 U-box Gene Family AT2G28830 28.819 5.22e-22 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00349 - - gmx:100803111 481.1