Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00348 ATGGAGGATAAATCAGAGAAGCAAGATGATAGCCACCCATCTCTCCTCCTCCTCCCTAATCATGGCACCATCAAGGAGGACAATTCTCCAAGGAAAGCCATTGGTGGTGGCAGTGATAGACTGAAGAGGGATGAGTGGAGTGAAGGGGCTGTGTCAACCCTTCTTGAGGCCTATGAGTCCAAATGGGTGCTCAGAAACAGAGCCAAACTCAAGGGCCATGACTGGGAAGATGTTGCAAAACATGTCTCATCAAGAGCCAACTCCACCAAGTCACCAAAGACTCAGACTCAGTGCAAGAACAAGATTGAGTCCATGAAGAAAAGGTACAGATCAGAGTCTGCAACCACTGCTGATGCATCATCTTGGCCTTTGTACTCTCGCCTTGATCTTCTCCTGCGTGGCACAGGACCAATATCTTCACTTCCACCACCACCACCAACACCAACAACAACAGTAGCACCATCATTTCAACCACCACATGCTACCACCAATAATAACCAGGCTATGGTGCTGCTGGAGCCTCCTTCACTGGCTGCTTCACAACCTCCTCCTTCTGTTGCTCCTCCACCACTCACAATTGCACAAAACTCTCATGGATCCAATGGTGTTGAAAGACTAGCCAAGGAAGATGGGTTAGGAGGCAAATCATCTGAGCATGTATCTAACAAGAATCTAATGGACTCGGATAGTAGCACACCTGCTCTATACAGTGAAAAGGAGAAGGTGAAATGCAACAAGAGGAAGATGAAAAGTGAGAATAACAACAAGAGGGTGAGAAGGAACAGTAATAGTAATAACAATAACCACAACAATGAAGACATGGACATAGCAGAAAGCATAAGGTGGCTAGCAGAAGTGGTGGTGAGATCAGAACAAACGAGAATGGACACAATGAAAGAAATTGAGAAGATGAGAGTTGAAGCTGAGGCAAAGAGAGGGGAGATGGAGCTCAAGAGAACTGAAATCATAGCCAATACTCAACTAGAGATTGCTAGGATCTTTGCAAGTGTCAACAAAGGTGTTGATTCTTCACTAAGAATTGGAAGAAGTTAA 1053 0.453 MEDKSEKQDDSHPSLLLLPNHGTIKEDNSPRKAIGGGSDRLKRDEWSEGAVSTLLEAYESKWVLRNRAKLKGHDWEDVAKHVSSRANSTKSPKTQTQCKNKIESMKKRYRSESATTADASSWPLYSRLDLLLRGTGPISSLPPPPPTPTTTVAPSFQPPHATTNNNQAMVLLEPPSLAASQPPPSVAPPPLTIAQNSHGSNGVERLAKEDGLGGKSSEHVSNKNLMDSDSSTPALYSEKEKVKCNKRKMKSENNNKRVRRNSNSNNNNHNNEDMDIAESIRWLAEVVVRSEQTRMDTMKEIEKMRVEAEAKRGEMELKRTEIIANTQLEIARIFASVNKGVDSSLRIGRS* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00348 350 MobiDBLite consensus disorder prediction 1 42 - -
Phac5g00348 350 Coils Coil 298 318 - -
Phac5g00348 350 MobiDBLite consensus disorder prediction 176 273 - -
Phac5g00348 350 MobiDBLite consensus disorder prediction 217 233 - -
Phac5g00348 350 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 34 336 IPR044823 -
Phac5g00348 350 Gene3D - 46 111 - -
Phac5g00348 350 Pfam Myb/SANT-like DNA-binding domain 43 130 IPR044822 -
Phac5g00348 350 MobiDBLite consensus disorder prediction 258 273 - -
Phac5g00348 350 MobiDBLite consensus disorder prediction 138 153 - -
Phac5g00348 350 FunFam Trihelix transcription factor ASIL2 46 111 - -
Phac5g00348 350 MobiDBLite consensus disorder prediction 136 163 - -
Phac5g00348 350 MobiDBLite consensus disorder prediction 234 257 - -
Phac5g00348 350 MobiDBLite consensus disorder prediction 25 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00348 Phac-Chr5 2875204 2877908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00348 5 153 Trihelix Transcription Factor Family AT3G14180 34.868 1.79e-20 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phac5g00348 Myb_DNA-bind_4 3.6e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00348 - - gmx:100799917 493.041