Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00313 ATGGAAGCCGCAGTGGTAGACCCCGGTTCCAGCCTCCTCAAAGCCGGTTTTGCAATTCCCGATCAAACTCCCCCCATGATAATTCCCTCTCAAATGAAGTCAATGCTCGATGATGGGTCAGTGACCGATAACCCAACATTCGACGAGGTTGCCGTGGATCCGGTTTGCCGAGGTTATGTCAGAGATTGGGATGCCATGGAGGATTTGCTGCATTATGTGTTGTATACTGGCCTTGGATGGGAAATTGGCAACGAAGGGCAGATACTGTTCACAGATCCACTTTGTAATCCGAAGGCTAACAAGGAACAGTTAGTGCAACTAATGTTTGAAACATTCAACATATCAGGGTTTTATGCTTCTGAACAAGCAGTGTTGTCACTATATTCTGTAGGACGTATCTCTGGATGCACAGTTGACATTGGTCATGGAAAAATAGATATTGCACCAGTGATTGAGGGTGCTGTTAACCACATTGCCTCAAGAAGATTTGAGTTTGGAGGTATTGATCTAACTAATTTCCTTGCTCAAGAACTTGGCAAATCCAATCCACGAGTGAATATCAGCATCTCTGATGTTGAAAAAATAAAACAGCTATACTCGTGCTGCGCTGAAGATGAATTAGCTTATCAGCAGACTCAAGATTCTTGCCCTGTGGAGACACATACCTTGCCTGACGGACAGGTCATTACAATTGGAAGAGAAAGATATACCATTGGTGAAGCTTTATTCCAGCCATGTCTTTTGGGTTTAGAGGCTCATGGTATTATTGACCAGCTTGTTCGTACTATTTCAAATGTGTCATCTGATAATCATCGCCAACTTCTTGAAAATACTGTGGTTTGTGGTGGCACTTCTGCTATGACTGGTTTTGAGGAAAGATTTCAGAAGGAATCTAGCCTAAGTTCATCTGCCATTCGACCTACCCTAGTAAAGCCTCCAGAATACATGCCAGAAAATTTAACCGTATATTCGGCATGGGTGGGAGGTGCCATACTTGCCAAAGTAGTTTTTCCTCAAAATCAACATGTAACTAAGGCAGACTATGATGAAACTGGGCCTTCCATTGTTCACAGGAAATGCTTTTGA 1086 0.4309 MEAAVVDPGSSLLKAGFAIPDQTPPMIIPSQMKSMLDDGSVTDNPTFDEVAVDPVCRGYVRDWDAMEDLLHYVLYTGLGWEIGNEGQILFTDPLCNPKANKEQLVQLMFETFNISGFYASEQAVLSLYSVGRISGCTVDIGHGKIDIAPVIEGAVNHIASRRFEFGGIDLTNFLAQELGKSNPRVNISISDVEKIKQLYSCCAEDELAYQQTQDSCPVETHTLPDGQVITIGRERYTIGEALFQPCLLGLEAHGIIDQLVRTISNVSSDNHRQLLENTVVCGGTSAMTGFEERFQKESSLSSSAIRPTLVKPPEYMPENLTVYSAWVGGAILAKVVFPQNQHVTKADYDETGPSIVHRKCF* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00313 361 FunFam Actin-related protein 7 165 252 - -
Phac5g00313 361 SUPERFAMILY Actin-like ATPase domain 2 138 IPR043129 -
Phac5g00313 361 SUPERFAMILY Actin-like ATPase domain 131 361 IPR043129 -
Phac5g00313 361 Gene3D Actin; Chain A, domain 4 165 252 - -
Phac5g00313 361 PANTHER ACTIN 4 354 IPR004000 -
Phac5g00313 361 SMART actin_3 1 361 IPR004000 -
Phac5g00313 361 FunFam Actin-related protein 7 4 127 - -
Phac5g00313 361 Pfam Actin 2 361 IPR004000 -
Phac5g00313 361 CDD NBD_sugar-kinase_HSP70_actin 4 168 - -
Phac5g00313 361 Gene3D - 123 324 - -
Phac5g00313 361 Gene3D - 5 355 - -
Phac5g00313 361 PRINTS Actin signature 100 113 IPR004000 -
Phac5g00313 361 PRINTS Actin signature 125 144 IPR004000 -
Phac5g00313 361 PRINTS Actin signature 217 233 IPR004000 -
Phac5g00313 361 PRINTS Actin signature 23 32 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00313 Phac-Chr5 2593191 2599684 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00313 5 361 Cytoskeleton Gene Families AT3G12110 37.234 2.05e-69 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00313 K16615 - gmx:100794153 687.952