Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00310 ATGTTACAGTGGGAACCCATGATCGAAATTTTTCCAGTGCTTAATGTCTTTGTCATTGACAATGACCTCAGTGTTTCTGAATACATCAAGAAAACATGCTCCTCCTCTAGCTATGACGTTATACCCTGCTTTGAATCTACGCTTGCTGCCAATTTTTTGCTGCATACAGAGGAGCCTATTCATTTGATACTCATTGAGGTTCACATGCCATTGATGAATGCCTATGAATTAATGGAATATCTCAACGAAGAACAAATTAATGTTCCTGTCATCATGATGTCCACGGATGGTAGCTGGGCTTCCATAATGAAGTCCATTGAAGTTGGAGCTTGTGATTATTGGATCAAACCCTTGTCTGAGGAACGGGTGGTGAATATGTGGATACATGCGAAGACCAACATAAAAGATAAGGAGCAAAAAGATATTGGTAGCCAGAAAGATGATGACAGAACAAGAGTGGTTGATGATTTTGATGATGATGATGATGAATCAGACAGTGGTGATAATGTACAATGGTCAGTAGGACTGCAATTTTTGTTTCACCAGGCTCTCATAAAAGTTGGATTGGAAGTATCCAAGCCCAAGGATATTCTTGAAATGATGAACGTGCCAAGTTTGGAACTAGAAGACGTTGAAAGTCATCTAGAGTTCATGAGAACTCTATATGGTGTGAAATCTTCTGATGCAACTGAGCTTAGCAGCCAAAATCTCCCCACAGACATTGATGATGAAACAATGGATGAAACCATCACAAAGCCTGCGCCTTAA 768 0.3997 MLQWEPMIEIFPVLNVFVIDNDLSVSEYIKKTCSSSSYDVIPCFESTLAANFLLHTEEPIHLILIEVHMPLMNAYELMEYLNEEQINVPVIMMSTDGSWASIMKSIEVGACDYWIKPLSEERVVNMWIHAKTNIKDKEQKDIGSQKDDDRTRVVDDFDDDDDESDSGDNVQWSVGLQFLFHQALIKVGLEVSKPKDILEMMNVPSLELEDVESHLEFMRTLYGVKSSDATELSSQNLPTDIDDETMDETITKPAP* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00310 255 MobiDBLite consensus disorder prediction 138 168 - -
Phac5g00310 255 SMART REC_2 14 127 IPR001789 GO:0000160
Phac5g00310 255 SUPERFAMILY CheY-like 14 131 IPR011006 -
Phac5g00310 255 NCBIfam myb-like DNA-binding domain, SHAQKYF class 169 219 IPR006447 GO:0003677
Phac5g00310 255 Gene3D - 13 151 - -
Phac5g00310 255 MobiDBLite consensus disorder prediction 138 153 - -
Phac5g00310 255 Gene3D - 166 223 - -
Phac5g00310 255 ProSiteProfiles Response regulatory domain profile. 15 131 IPR001789 GO:0000160
Phac5g00310 255 Pfam Response regulator receiver domain 16 125 IPR001789 GO:0000160
Phac5g00310 255 MobiDBLite consensus disorder prediction 228 255 - -
Phac5g00310 255 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 224 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00310 Phac-Chr5 2555517 2556728 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00310 11 205 Response Regulator Gene Family AT4G16110 31.034 7.18e-23 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac5g00310 Response_reg 1.1e-14 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00310 - - pvu:PHAVU_005G022600g 210.305