Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00252 ATGGAGGAAGCCAAAGAGAGGTTAAAGCAAACTCACTCATTTTTACTGTTTGAAGATACTGATTCTCCCATAATGCTGCTCAACTTCTTGGTCTGCTCTATTCTGTGGTTCCTGAGGAGACAAATCATTCAAATTCTACTTCATTTTGACCATTTCTATTGCCTTGTACAAATGGCATCAAGCTCAATGTCTTCCACTGGCTCATGGAGTGCCAAGGACAACAAAGCCTTTGAAAGGGCTCTAGCTGTTTATGACAAGGACACTCCTGACCGTTGGTACAATGTTGCTAAGGCTGTTGGTGGAGGGAAGACTCCAGAGGAAGTGAAGAGGCACTATGAACTCCTCCTCAGGGATGTTAGGCACATTGAATCAGGACAAGTGCCTTTCCCAAATTACAAGCAAAGTGGAGGGTCTGAAGAGGAGAAAAGGCTGAGAAACATGAAGCTCCAGTGA 453 0.4437 MEEAKERLKQTHSFLLFEDTDSPIMLLNFLVCSILWFLRRQIIQILLHFDHFYCLVQMASSSMSSTGSWSAKDNKAFERALAVYDKDTPDRWYNVAKAVGGGKTPEEVKRHYELLLRDVRHIESGQVPFPNYKQSGGSEEEKRLRNMKLQ* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00252 150 ProSiteProfiles SANT domain profile. 64 120 IPR017884 -
Phac5g00252 150 MobiDBLite consensus disorder prediction 136 150 - -
Phac5g00252 150 Gene3D - 59 129 - -
Phac5g00252 150 FunFam Transcription factor SRM1 61 129 - -
Phac5g00252 150 CDD SANT 75 116 IPR001005 -
Phac5g00252 150 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 58 143 IPR044636 GO:0003700
Phac5g00252 150 ProSiteProfiles Myb-like domain profile. 61 116 IPR001005 -
Phac5g00252 150 SMART sant 65 118 IPR001005 -
Phac5g00252 150 MobiDBLite consensus disorder prediction 126 150 - -
Phac5g00252 150 SUPERFAMILY Homeodomain-like 67 124 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00252 Phac-Chr5 2132000 2133931 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac5g00252 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00252 - - gmx:100804396 179.874