Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00228 ATGGAATCGCCGCAGCCAGGTTCAAGAGGAGCAGAAGCCCTTAAAAATATAGCTCCTGGATCATCTATTTCTGTTGCATATCACCCACTTTTTGGACCTCATGATGACCTCCTCCTTCTAGAGCTTGATGAGAAACTTCTCCCAGATGTTCTGCATGAAAGGGTGGTCTTGAGAGGACAGCCTGATGAAGATGCAGTTCTTTGTACTCAATCCAAAACATATGCTATGAAGTTTGTTGGAACTTCCAATTCGGTTCTGCTTGTACCACCAGCAAGTCATTCAGAATTTTGTGAAAATCCACAAAAGAATGATAGTAATATGGAAGAAGATAAAGTTGTTGCACCTGTAATCAAAGTTGTATCTGGTAATATGGAGCTTGTAGAGACGGCCCCCAGACTTGATAAACTTAAGTCCTTTCTATCAGAAAAGACGTACAATTTTGAGGTGTATGACGTGGGAAATTTAGAAGACAATCAGGAATCTACAATAGGATTATATAACTGGAATGATCTTGTCAACAATATCCAAGCTAGTGATGAGGAGTTAAGGTCTGGACTGCAGGCTCTTTCAGCAGTGGAGATTAATGGATATTGGAGATTAGTAGATGGGAGTTACATGGACATGATTTTAGGAATGCTTTTGAAAAATTCGGTGTTGAATGATTGGTCACTTAATGCTTTAAACGAAGATGAAGTTGTTTGTACACTGGAATCAGATGGATTTCCTGGGGTGCTAGCAAGGCATTGTTTGCATACATATGGCACCAAATTAAATGAAGGCATGCCTGGCCGTGTCTGGAAGTTGGATGAGAAGCGAGTATGCATACATTTTGCAAAAGAAATCCTGAAAGGGGGCAAAAGGAAGTTAGAGAGTTTCATGGATGAATGGAGGCAGAAGGTTCCAGATGGAATGCAGCCCAGTTTTGATCTTATGGAAGGAGAAGTATTGACAGAGAGAGTTGGAGTTGAGACATGGATTCGCACCTTCAGCGTTGCATCTTTGCCTTCCACTCCAGCTGAGCGTTTCTCCATTCTTTTTAGAGAGAGGAAAAAATGGGAATGGAAAGATCTGCAGCCCTATGTCAGAGATCTGAAGGTACCAGGTCTTTCTTCAGAAGGTTTGCTACTCAAATACACTCGAAGAACACAACCATCACCTGATGCAGAACCGGTTTTCAGCGCAAGATAG 1188 0.4175 MESPQPGSRGAEALKNIAPGSSISVAYHPLFGPHDDLLLLELDEKLLPDVLHERVVLRGQPDEDAVLCTQSKTYAMKFVGTSNSVLLVPPASHSEFCENPQKNDSNMEEDKVVAPVIKVVSGNMELVETAPRLDKLKSFLSEKTYNFEVYDVGNLEDNQESTIGLYNWNDLVNNIQASDEELRSGLQALSAVEINGYWRLVDGSYMDMILGMLLKNSVLNDWSLNALNEDEVVCTLESDGFPGVLARHCLHTYGTKLNEGMPGRVWKLDEKRVCIHFAKEILKGGKRKLESFMDEWRQKVPDGMQPSFDLMEGEVLTERVGVETWIRTFSVASLPSTPAERFSILFRERKKWEWKDLQPYVRDLKVPGLSSEGLLLKYTRRTQPSPDAEPVFSAR* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00228 395 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 10 395 IPR019128 GO:0007064|GO:0031390
Phac5g00228 395 Pfam Sister chromatid cohesion protein Dcc1 38 361 IPR019128 GO:0007064|GO:0031390
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00228 Phac-Chr5 1840160 1843836 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00228 10 395 C3H Transcription Factor Family AT2G44580 57.653 1.37e-162 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00228 K11271 - gmx:100817511 679.863