Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00224 ATGGCTCCGAAGAGGAAGAAACTCAATCCTCAGCAACCTTCCAAGTTCGGCATCCAGCACTTCTTCGATCGCGCTTCTCAGAAAGCCCACCACCTTCAACCCCACACCACCACCACCACCACCGCCGCCGCCGCCGCCGCCGTCACCGCCTTCGATACGACCACAATCACCACCATCGATTCACCACAAGAACCCGACGAAGTGTCTCCGCAGACGCGCTTCAACTTCTCACCTGGAATGTTAGTGAAGCAGAGCCAGGATGACGCCGTCAACGAGGTCACCTGGAAAATATCTCCCGTGAATGAGAGGCTTCAGGCAGTTTCCAAACACACGCCTGAAGTGATCAAAGCTTTGGCTGCCTCTTCCAAAATGAACTTGTCGCCAATTCGCAATCACAGCGGCAAGGAGACTTGTCTGGACAAGGTTGCTTCGCCAACTCTCAAGGTGCCGTTGAGCTTCAAGAGGATAACCTCGGCCCCTGATGTGATTGGACAGAGTCCCTTCAGAACTCCACCGTCTCTGTCTTATCGCCCTGACAAGGTGCAGCGTGGCAAGGATATTGAACACAAGGGACCGTGCGACCAACCTTTATTAAGACAGAACAAAAAGGCATTGCTTGAACTCTTAGATCAAGTTGAAGATGCCATTGCTGTTGATGATGCTCCAGTTTGCCACAGCAACACTTATTCCTTTGAAGTACCTCAAAATCAAGCTAATGAGCTCCCTGTCAAAGTCAAACCTGCAGTAGAAAGGACCAAATCACATTTACCTAAAGAGGTTGTTGATGTCTTCACCAATTCTAATTATTTGGTTCTGGAGGTATCTGAACATAGGTCTGCTGATTCAAATGCTGCTCAATGCTCATACAAGGTGCTACGTTTGCTAAGTGAACAAACTGGGGAAGAGCGGGCTGTAAACTTACAGAATGAGTGGTACTGTAGTGTAATTGCACCTGGAGATACTGTGCACGTAATTGGTGAATTTGATGAAGGGGGGAATTGTGAAATTGATCATGATAACAATTTTTTGATTGTACACCCAGATATTCTATTGTCTGGAACTCGGGTTTCTTCCAGTTTTAATTGCCCAAGGAGAACTGTCTTAGACGAGAGGCTGAAAAACAATGATTACTCAACTGCAGCATTAGCTGGAACAATGCTGCACCAAATTTTCCAGGCTGGGCTTACAAAAGACCATCCTACAGTAAATTTCATGGAAGATTATGCTGAAGTGGTATTGCAGAAAAACATTGAAAGTTTGTATGCATGTGGAGTTAATGAAAACGACGTTCGCAAAACCATGAGAGATGCTATTCCTAGAATATTAAGTTGGATCATGCGGTTTAAAAATACGGAGGAAAGAAAAGACCCGAATGTCCAATTTGGATTTGATAATGGGCCAAAGAATGTTAGCATATCTGAGGTAATTGATATTGAAGAGATGGTGTGGGCTCCAAAATATGGTTTAAAAGGGATGATTGATGCTTCGGTCAGAGTGAAAATTCAATCACAAAAAGATCAACAGGAGGAAAAGATTATGCCATTAGAGTTCAAAACTGGAAAAACACCAAATAGCCAGTCATCAGTTGAACACAGTGCCCAAGTAATTTTGTACTCTCTCTTGATGTCTGAAAGGTATCAGACAACTGTTGATTCTGGTCTTCTATATTATCTTCAATCTGATCAGACACAGGGCATCGTGGTTCAAAGATCTGACCTAACTGGGCTAATAATGCAACGAAATGAACTAGCAAGTTATATTCTTAAGGCATTGAGTCTACAACAACTTCCTCCAATGTTACAGATTCCTCACATTTGCAGAGGTTGTCGCCATCTTAATGTTTGTAGTGTTTATCACAAGGCAAATGGTGGAAGCACAGAGAGCAGTGGGTTGGGAGAGGTTTTTGATTCTCTTACTAATCACATGACTACTTCACATTTTAAGTTTCTCCGCCAATGGGATCGATTGATTGACTTAGAAGCTAAAGAGACTGAGATTTTAAGGAAAGAGGTGTGGCAATCACATAGTTCAAACAATAGTGGTCTTTCTTCTATTGTTCTTGATGACTCACTAGGAATACCTCTTGAGAAATCTTTCAAAGATGACCAATTCACTTATCGTTTCATACAACAAGATTCTTCTTCTAACCTCTCTGAAGTTTCTAATGTGTCTTCTAGTGCCCCATTGAAAAACCATTTAGATTTCACACTTCGAAGTGGAGATCATGTGATACTGGGTAATCAATCTAGCCATCAAATTATTGCTAAAGGGGTGATATCTGATATTAGTCCGATCCATGTATCTGTTTCCTTTCCTAAGCGTTTACGAATTCCCGGGAGTTCTTCCACAGCACATGATCTCATTCAGCAGGTTTGGAGAATTGACAAGGATGCAGCTGTGACTTCCTTTGCAATTATGAGGTTTAATCTTGTACAACTTTTTCTACAAAATGATCGAAGTGCTCATTTGCGGAGGATGATTGTTGATCTTGAGGCTCCTAGATTTGACAGTGGATCTGTACTTAGTCAGGATCCTGCGATATCCTATGTTTGGTCAGAGAAGAGTTTGAATTACGACCAACGTAGAGCAATTCTCAAGATACTTACAGCAAAAGATTATGCACTTATATTAGGGATGCCTGGAACAGGGAAAACGTCCACATTAGTCCATGCTGTGAAAGCCTTGTTGATTAGAGGGACATCCATTTTGCTAACAGCCTATACAAATTCTGCTGTTGATAATTTACTCATCAAATTAAAAGCACAGGGGATTGATTTTGTACGAATTGGAAGACACGAAGTAGTGAATGAGGTGGTCAGAGAACACTGCCTCTCAGCAATGAGTGTACAAGGTGTTGAAGATATCAAAAGAAGGTTGGAACAAGTCAAAGTTGTTGCAGTTACTTGTCTTGGCATTTCTAGTCCCTTGCTTGCCAACACAAGGTTTGATGTATGCATTATGGATGAAGCTGGACAGACAACTTTACCAGTGTCCTTGGGTCCTCTAACGTTTGCTTCGATGTTTGTACTTGTTGGGGATCATTATCAACTGCCACCACTTGTCCAGAGTACAGAAGCCCGAGAGAATGGCATGGGGGTAAGTTTGTTCCGTAGGCTCTCAGAAGCACATCCGCAGGCTATTTTAGCCTTACAGAGTCAGTATCGTATGTGTCAGGAGATTATGGACCTTTCAAATGCCTTGATATATGGTGATAGATTGAGGTGTGGTTCAGTTGAGGTAGCTAATGCAAAACTTGAGTTTTCAGACTTAAGCTGTGACTTGCCTTGGCTAGAACATGTTTTGAATCCTCGAAGACCTGTTATATTTATTGATACTGACAAGTTGCCCGCATTAGAGGCAAGAGATCACAAGCTTGTAAATAATCCTATTGAAGCTCAGATAATTGCTGAGATTGCAAAAGAATTAGTTAAAAATGGAATTGGAGAAGAACAGATTGGCATTATCACTCCATATAATTCACAGGCAAACCTCATTCGTCGTGCTGTTTGCATGACATCCTTGGAGATACATACCATTGACAAATATCAGGGTAGAGATAAAGACTGTGTGTTATTATCTTTTGTAAGGTCTACCGAAAATCCAAAAAGCTATGCTGCGTCTCTGCTTGGAGATTGGCACAGGATGAATGTGGCTCTTACTCGTGCTAAGAAAAAGTTGATAATGGTAGGGTCTAGGAGAACTCTATCAAAGATTCCTTTACTGAAACTTCTTATTGGCAAAGTTGAGGAGCAGTCTGGAATTTTAAGTGTTTCTCATAAGGATATGTATAGAAAAGGTGAGCTCAAGAGATGTTCTCAACTGAGATGA 3828 0.4188 MAPKRKKLNPQQPSKFGIQHFFDRASQKAHHLQPHTTTTTTAAAAAAVTAFDTTTITTIDSPQEPDEVSPQTRFNFSPGMLVKQSQDDAVNEVTWKISPVNERLQAVSKHTPEVIKALAASSKMNLSPIRNHSGKETCLDKVASPTLKVPLSFKRITSAPDVIGQSPFRTPPSLSYRPDKVQRGKDIEHKGPCDQPLLRQNKKALLELLDQVEDAIAVDDAPVCHSNTYSFEVPQNQANELPVKVKPAVERTKSHLPKEVVDVFTNSNYLVLEVSEHRSADSNAAQCSYKVLRLLSEQTGEERAVNLQNEWYCSVIAPGDTVHVIGEFDEGGNCEIDHDNNFLIVHPDILLSGTRVSSSFNCPRRTVLDERLKNNDYSTAALAGTMLHQIFQAGLTKDHPTVNFMEDYAEVVLQKNIESLYACGVNENDVRKTMRDAIPRILSWIMRFKNTEERKDPNVQFGFDNGPKNVSISEVIDIEEMVWAPKYGLKGMIDASVRVKIQSQKDQQEEKIMPLEFKTGKTPNSQSSVEHSAQVILYSLLMSERYQTTVDSGLLYYLQSDQTQGIVVQRSDLTGLIMQRNELASYILKALSLQQLPPMLQIPHICRGCRHLNVCSVYHKANGGSTESSGLGEVFDSLTNHMTTSHFKFLRQWDRLIDLEAKETEILRKEVWQSHSSNNSGLSSIVLDDSLGIPLEKSFKDDQFTYRFIQQDSSSNLSEVSNVSSSAPLKNHLDFTLRSGDHVILGNQSSHQIIAKGVISDISPIHVSVSFPKRLRIPGSSSTAHDLIQQVWRIDKDAAVTSFAIMRFNLVQLFLQNDRSAHLRRMIVDLEAPRFDSGSVLSQDPAISYVWSEKSLNYDQRRAILKILTAKDYALILGMPGTGKTSTLVHAVKALLIRGTSILLTAYTNSAVDNLLIKLKAQGIDFVRIGRHEVVNEVVREHCLSAMSVQGVEDIKRRLEQVKVVAVTCLGISSPLLANTRFDVCIMDEAGQTTLPVSLGPLTFASMFVLVGDHYQLPPLVQSTEARENGMGVSLFRRLSEAHPQAILALQSQYRMCQEIMDLSNALIYGDRLRCGSVEVANAKLEFSDLSCDLPWLEHVLNPRRPVIFIDTDKLPALEARDHKLVNNPIEAQIIAEIAKELVKNGIGEEQIGIITPYNSQANLIRRAVCMTSLEIHTIDKYQGRDKDCVLLSFVRSTENPKSYAASLLGDWHRMNVALTRAKKKLIMVGSRRTLSKIPLLKLLIGKVEEQSGILSVSHKDMYRKGELKRCSQLR* 1276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00224 1275 FunFam DNA replication ATP-dependent helicase/nuclease DNA2 798 947 - -
Phac5g00224 1275 Gene3D - 352 616 IPR011604 -
Phac5g00224 1275 Pfam AAA domain 1032 1232 IPR041679 -
Phac5g00224 1275 FunFam DNA replication ATP-dependent helicase/nuclease DNA2 952 1053 - -
Phac5g00224 1275 FunFam DNA replication helicase 1054 1267 - -
Phac5g00224 1275 Pfam Domain of unknown function DUF83 505 616 IPR022765 -
Phac5g00224 1275 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 855 1240 IPR027417 -
Phac5g00224 1275 Gene3D - 1054 1262 IPR027417 -
Phac5g00224 1275 CDD SF1_C_Upf1 1056 1245 IPR047187 -
Phac5g00224 1275 CDD DNA2_N-like 352 587 - -
Phac5g00224 1275 Gene3D - 798 948 IPR027417 -
Phac5g00224 1275 Gene3D - 955 1053 IPR027417 -
Phac5g00224 1275 FunFam DNA2-like helicase 735 797 - -
Phac5g00224 1275 Pfam AAA domain 856 947 IPR041677 GO:0004386
Phac5g00224 1275 Pfam AAA domain 956 1023 IPR041677 GO:0004386
Phac5g00224 1275 CDD DEXXQc_DNA2 855 1055 IPR026851 GO:0017116
Phac5g00224 1275 Pfam DNA replication factor Dna2 297 499 IPR014808 -
Phac5g00224 1275 PANTHER DNA2/NAM7 HELICASE FAMILY 228 1246 IPR045055 -
Phac5g00224 1275 FunFam DNA replication helicase Dna2 460 616 - -
Phac5g00224 1275 Gene3D - 735 797 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00224 Phac-Chr5 1819462 1835984 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00224 12 997 Core DNA Replication Machinery Family AT1G08840 55.136 0.0 1064
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00224 K10742 - gmx:100799415 2028.45