Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac5g00222 | ATGATTAGCTTCATTCACACAGAAACTGAAATGGCTTCTGCAAGTAACTCCAATCCAAATCCATATCCATGGACCCCTAAGGATTGTTCTCAAGGGATCTGCAGCATCTACTGTCCCCAGTGGTGTTACATAGTCTACTCTCCTCCCCCTCCTTCACTCTTCCTTGGTGGTGATGCTGATGATGACCCTTCAGCCTTTCAGTTCTCACCTCTCATAGTTGCTGTGATTGGAATATTAGCCAGCACTTTCATCTTGGTCACATACTACACCATCATCTCAAGGTTCTGCAGGAGAAGAAGCATGCACTCCAATGATCTAGCAGAAGATGGGAGCAGTGAACTGGCTCAGGTTTCTTCTTCTTCTAACTCTGGTTTGGATGAGGCTCTCATCAAGTCCATCACAGTTTGCAAGTACACCAAAGGGGGAGGGGTGGTGGAGGGTCATGATTGTTCTGTTTGTTTGAGTGAGTTTGAAGAGAATGAGAGCTTGAGATTGTTGCCAAAATGCAACCATGCTTTTCATCTCCCTTGCATTGATACTTGGCTCAAATCTCATGCCTCTTGCCCCTTGTGCCGTTCCACCATCACCATTGTTTGTCCAAATCCAGCCATGGAACCACCACCAAGAGTCATTGTCAATGCCTTGGAATATCAGCAAAGAAGTAGCCATGTTGTTGTTGTGGTTGCTCAGAGCTCTGAGCAACAGGGGAAGGTGGTAACTTTTGATTCTCACACTTTGAATCAGAGTGAAGGGTGA | 756 | 0.459 | MISFIHTETEMASASNSNPNPYPWTPKDCSQGICSIYCPQWCYIVYSPPPPSLFLGGDADDDPSAFQFSPLIVAVIGILASTFILVTYYTIISRFCRRRSMHSNDLAEDGSSELAQVSSSSNSGLDEALIKSITVCKYTKGGGVVEGHDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHASCPLCRSTITIVCPNPAMEPPPRVIVNALEYQQRSSHVVVVVAQSSEQQGKVVTFDSHTLNQSEG* | 252 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac5g00222 | 251 | SMART | ring_2 | 150 | 191 | IPR001841 | - | |
Phac5g00222 | 251 | CDD | RING-H2_EL5-like | 149 | 192 | - | - | |
Phac5g00222 | 251 | PANTHER | RING-H2 FINGER PROTEIN ATL16 | 63 | 229 | IPR044600 | GO:0016567|GO:0016740 | |
Phac5g00222 | 251 | SUPERFAMILY | RING/U-box | 144 | 201 | - | - | |
Phac5g00222 | 251 | Pfam | Ring finger domain | 149 | 192 | IPR001841 | - | |
Phac5g00222 | 251 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 111 | 197 | IPR013083 | - | |
Phac5g00222 | 251 | FunFam | RING-H2 finger protein ATL54 | 125 | 198 | - | - | |
Phac5g00222 | 251 | ProSiteProfiles | Zinc finger RING-type profile. | 150 | 192 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac5g00222 | Phac-Chr5 | 1816141 | 1817979 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac5g00222 | 14 | 195 | C3H Transcription Factor Family | AT3G03550 | 55.340 | 6.48e-67 | 209 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac5g00222 | - | - | vun:114168871 | 404.445 |