Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00220 ATGGACAACCAAAGCACCAACAACAGCTTCTCTCTGGTGGGTCTTCTTCATTCCCTACACTCCTCTGAGATTCTCAGGGACTTCGCCACGCGAGAACTCAACGCGTTTCTATGGCTATCTCTTGTTGTTGTCACCACCCTTTTGCTCAGAAGGCTCTTTAGCCTCTTTGGGTTATGGCGCAAGGCTAGAACCATTCCTGGGCCTCCCTCTTCCTCTTTTTTTGGCGGCTGCAAGCTCTTTTCCCGCCCAAATTTCACCTTCACTGATGTGTTGTCAGAATCCCATAAAAAGTATGGACCTATTGTTAAACTGTGGTTGGGTCCTACTCAGCTTTTGGTGTCCGTAAGGGATCCAGTGTTAATCCAAGAGATGCTTATAAAAGCTGAGGATAAGTTGCCTTACACGGGAAAACTGTTTCATCTAGCCTTTGGGCAATCAAGCCTCTTTGCCCCTTCATTTGAAAAGGTGCAAAAGAGAAGGGAATTATTGGCAACAGAATTAAACGAAAGATTGCTGAAGAATGGTGATATGATTCCTCTGAAGGTTGCAGACTTTATCACAGATAAAATAGAAAACATAAAAAAGAAAGGAGGTGTTGATTCCAGGTTGGTTTCTCAACATATCGCTTTCACTATAATGGGAGTCACGTTCTTTGGAGATGGCTTCTTGGCCTCGCCGAAGGCTGCAATGTATGAGGAACTGTTCATGACGATCGCGAAAGATGCTTGCTTTTGGGCGTCCTATAATGTTACACCTTTCTGGAGACATGGATTTTGGAGGTACCAATGCTTATGCACAAAGTTGAAATGCTTAACTCAAGACATTCTTCAACACTGCAGAAAAGGCTGTAAACTATCTGGCCACACTGATCAAGATGTACATAATGAAAGTTCTAATAAAGAAATGAAGTCAGCAGTTGGTGCACAATGCTCTTCTGATGATGAGTTCCAAGATTACTATTTCTTTCGAGATCTTAAGGATCATCAAGATGGTAAAGAAGAACCTTGTGGGAATGTCATGCGCATGATATTTCATGGATGTCAAACTACATCTGTTCTAATCACGGATGTATTGACTAGGCTTGTCATGCATATGGAAATACAGGATAAGGTTTATTCAGAGATCAGCATGGTAGGAAGAAACCCATCAAAATTTGAGCACGAAAATGTTTATAGGATGCCTTTGTTATTGGCTACAATTTATGAATCTGCACGCCTTCTGCCCACTGGCTCCATGCTGCAGAGGTGCTCTTTGAAACATGACTTGAGCTTTGCAACTGGTGTAACCATACCTGCTGGAGCTGTATTGGTTGTACCTGTTGAATTGGTACAGAAGGATAAGTTTACTTGGGGGAGTGATGCAAGTCATTTCAATCCTTACCGATTTCTCTCAACTGTTACAAATAAATCAGCATTCCTTCCTTTTGGATCTGGTGCACGTGCCTGCATTGGACAGAAATTTATCATCCAACTTGTTGCCTCAGTGTTGGCATCATTGCTAAATAAATATGAGATACGGCTTAGCTCAGGCTTAGATGATGACTCAAACACAACTTTGAAAGATAATCTTCTCCAGCGTCATCCCAGTTCACAGATATTATTCGTGAGAAGGGACCAGTGA 1620 0.4222 MDNQSTNNSFSLVGLLHSLHSSEILRDFATRELNAFLWLSLVVVTTLLLRRLFSLFGLWRKARTIPGPPSSSFFGGCKLFSRPNFTFTDVLSESHKKYGPIVKLWLGPTQLLVSVRDPVLIQEMLIKAEDKLPYTGKLFHLAFGQSSLFAPSFEKVQKRRELLATELNERLLKNGDMIPLKVADFITDKIENIKKKGGVDSRLVSQHIAFTIMGVTFFGDGFLASPKAAMYEELFMTIAKDACFWASYNVTPFWRHGFWRYQCLCTKLKCLTQDILQHCRKGCKLSGHTDQDVHNESSNKEMKSAVGAQCSSDDEFQDYYFFRDLKDHQDGKEEPCGNVMRMIFHGCQTTSVLITDVLTRLVMHMEIQDKVYSEISMVGRNPSKFEHENVYRMPLLLATIYESARLLPTGSMLQRCSLKHDLSFATGVTIPAGAVLVVPVELVQKDKFTWGSDASHFNPYRFLSTVTNKSAFLPFGSGARACIGQKFIIQLVASVLASLLNKYEIRLSSGLDDDSNTTLKDNLLQRHPSSQILFVRRDQ* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00220 539 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac5g00220 539 PRINTS E-class P450 group I signature 354 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac5g00220 539 PRINTS E-class P450 group I signature 482 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac5g00220 539 PRINTS E-class P450 group I signature 472 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac5g00220 539 CDD cytochrome_P450 99 530 - -
Phac5g00220 539 Gene3D Cytochrome P450 59 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac5g00220 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 475 484 IPR017972 GO:0005506|GO:0016705
Phac5g00220 539 PANTHER CYTOCHROME P450 FAMILY 4 43 510 - -
Phac5g00220 539 SUPERFAMILY Cytochrome P450 65 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac5g00220 539 PRINTS P450 superfamily signature 473 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac5g00220 539 PRINTS P450 superfamily signature 398 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac5g00220 539 PRINTS P450 superfamily signature 345 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac5g00220 539 PRINTS P450 superfamily signature 482 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac5g00220 539 Pfam Cytochrome P450 66 531 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00220 Phac-Chr5 1784324 1789938 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00220 33 528 Cytochrome P450 AT1G13710 24.324 1.33e-22 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00220 - - vum:124847778 957.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g00220 5 1784324 1789938 Phac5g00220 5 1784324 1789938 ECH