Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00213 ATGAGAAAGAAGCTCGACACCCGTTTCCCTGCTGCACGAATAAAGAAGATAATGCAAGCAGATGAGGATGTCGGAAAGATAGCATTGGCAGTTCCTGTTTTAGTATCTAAAGCTCTGGAGTTATTTTTGCAAGATCTCTGTGACCGCACTTATGAAATAACTCTTCAGAGAGGAGCAAAGACCATGAATGCACTGCATTTGAAACATTGTGTACAAAGTTATAACGTCTTTGACTTTCTGAGAGACATTGTCAGCAGGGTTCCTGACTATGGGCATGGACATGGCCATTCTGAGGCTGGAGCCGATGATCGTGCCCTTTCAAAGAGAAGGAAAGCTGCTGGTGTTGAGGGCAATGAAAGTGATGAAGAGACCAAGAGGAGTAAGATGCGTGAGTTGGGCCACACCGGCACTCCCGGTAGGGGAAGAGGCCGAGGTAGAGGAAGAGGCCGTGGTCGAGGGATTCGAGCTGTTGAAACAGACATCGGTCATCAGCAGGTTGAATCTGAGCCTTGCTCCTCTATTCAACAGATTAGCAATGATATTCCTAACACAAGTCTGCCAATAGATAATGGTGTGCAATCCCTGGAGTCTTCAAAGGAGAACTTTGCAGCTCATGAGGAAAGTACTCAATCTTTCCGTAACATTGATCTGAATGCTAACTTAAACGAAAATGAAGACAAAAATGCTAGTGAAGCTGTTCAGGCTTCAGTGCCCGAGCCTGCAGACATGGACATTAAACATGAAGAAATTCCAGGCTGGTCCTTATCTGACGTCGACAAGATGGCCATTGATACTATGCAACTTGCAACCCTCGGTAGTAGACTAGAAGAGGATGATGAAGATTATGATGAGGAAGGGTAA 861 0.4541 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNALHLKHCVQSYNVFDFLRDIVSRVPDYGHGHGHSEAGADDRALSKRRKAAGVEGNESDEETKRSKMRELGHTGTPGRGRGRGRGRGRGRGIRAVETDIGHQQVESEPCSSIQQISNDIPNTSLPIDNGVQSLESSKENFAAHEESTQSFRNIDLNANLNENEDKNASEAVQASVPEPADMDIKHEEIPGWSLSDVDKMAIDTMQLATLGSRLEEDDEDYDEEG* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00213 286 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Phac5g00213 286 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Phac5g00213 286 SUPERFAMILY Histone-fold 4 98 IPR009072 GO:0046982
Phac5g00213 286 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 118 - -
Phac5g00213 286 MobiDBLite consensus disorder prediction 91 137 - -
Phac5g00213 286 FunFam dr1-associated corepressor homolog 1 86 - -
Phac5g00213 286 MobiDBLite consensus disorder prediction 91 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00213 Phac-Chr5 1673260 1678163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00213 1 275 CCAAT-HAP5 Transcription Factor Family AT3G12480 50.523 6.23e-78 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Phac5g00213 CBFD_NFYB_HMF 1.3e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00213 K21752 - gmx:100810093 453.751