Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00207 ATGTCAGAGAGAAATGAAAATAAAGGAAAGAGAATCATCATTGGTGTCTCAGCCTTATTCTTTCTGGCTATAGTTGGGGTTGTCATATTTGGTATCAACCTTATTGATAATGGTTCAAATGGTGATAAAGAGAATATTAATAACAACAAGAACCATGTTGCCTCCACCGTAAAAGCAGTCCAAAGTCTTTGTCATCCCACAAATTATGAGAAAGAATGTGAAGAAAGCCTCATAGCAGGGGCTGGAAACACCACAGATCCAAGAGAACTTATCAAAATTGCCTTCAATATAACTATTACAAAAATTGGTGATAAACTCAAAGAAACTAATCTCTTGCATGACGTTGAGAAGGATCCTAGAGCCAAGATGGCACTTGACACATGCAAACAACTCATGGATCTTTCAATTGGGGAGTTATCAAGGTCAATTGATGGAATAAGCGAATTTGAGGTGATAAATGTCGAGAAAATCCTCATGAATATAAAAGTTTGGCTTAGTGGTGCAATTACATACCAAGACACTTGCTTGGATGGGTTTGATAATACCACTAGTGAAGCTGGCAAAAAGATGAAGGATTTATTAATGACAGGCATGCATATGAGTAGCAATGCTCTTGCCCTTGTAACAGAATTGGGTGATACAATTACAAATTTGAATGTCACACAATTACTCGGACGTCGCCTCCTTGAAGATTCTGAGTCACCTTCATGGATTGATAATCATGGACTACCCAATGCAAATGCAAGTCTATTTAATCAAAAGCCTAATGTGACGGTAGCTCAAGATGGTAATGGAGATTTCAAAAGCATTAATGAGGCACTGAAGCAAGTGCCTGAGAAAAATAAAAAGCCATTTGTGATCTACATCAAGGAGGGCACCTACCAAGAGTATGTTGAAGTTGCAAAGAATATGACTCATGTGGTTTTCATTGGTGATGGTGGAAAAAAGACACGAATAATAGGCAACAAAAACTTCATTGATGGAATCAACACTTATAGAACTGCCACCGTTGCTATTCAAGGAGATTACTTTGTGGCCATCAACATGGGATTTGAGAACTTTGCTGGACCTCACAAGCATCAGGCAGTGGCATTGAGAGTCCAAGCAGACAAGTCTATCTTCTACAATTGTTCAATGGATGGGTATCAAGATACACTTTACGTACACACCATGCGTCAATTCTATAGGGATTGCACCATTTCAGGTACCATCGACTTTGTGTTTGGAAATGCACTTGCTGTTTTCAAAAATTGCACTTTTGTGGTTCGAAAGCCATTGAAAAATCAACAATGCATTGTGACGGCACAAGGTAGAAAAGAGAAACAACAACCATCTGGAATAGTAATCCAAGGGGGGTCCATTGTGTCTGACCCTGAGTTTTACTCAGTAAGATTTGAGAATAAAGCTTACCTAGCTCGTCCATGGAAGAATTACTCTAGGACCATTATCATGGACACTAACATTGATGACTTGATTCATGCTGACGGGTATTTGCCATGGCAAGGACCAGAAGGCCCTACTGGTATGGATACTTGCTTTTATGCCGAGTATCACAATACTGGCCCTGGTTCAAACAAATCCAACCGTGTGAATTGGCCTGGGATTTGGAATCTCAATTCAAAAGCCGCACGTTCGTTTTCGCCTTCTAAGTTCTTTCATGGAACTAACTGGATTCAGGTTACTGGGATTCCTTGCTTCCCTGACATCCCCAAACACTATAGGCACAAGAAGACGATACTTGACTGGTGA 1749 0.3997 MSERNENKGKRIIIGVSALFFLAIVGVVIFGINLIDNGSNGDKENINNNKNHVASTVKAVQSLCHPTNYEKECEESLIAGAGNTTDPRELIKIAFNITITKIGDKLKETNLLHDVEKDPRAKMALDTCKQLMDLSIGELSRSIDGISEFEVINVEKILMNIKVWLSGAITYQDTCLDGFDNTTSEAGKKMKDLLMTGMHMSSNALALVTELGDTITNLNVTQLLGRRLLEDSESPSWIDNHGLPNANASLFNQKPNVTVAQDGNGDFKSINEALKQVPEKNKKPFVIYIKEGTYQEYVEVAKNMTHVVFIGDGGKKTRIIGNKNFIDGINTYRTATVAIQGDYFVAINMGFENFAGPHKHQAVALRVQADKSIFYNCSMDGYQDTLYVHTMRQFYRDCTISGTIDFVFGNALAVFKNCTFVVRKPLKNQQCIVTAQGRKEKQQPSGIVIQGGSIVSDPEFYSVRFENKAYLARPWKNYSRTIIMDTNIDDLIHADGYLPWQGPEGPTGMDTCFYAEYHNTGPGSNKSNRVNWPGIWNLNSKAARSFSPSKFFHGTNWIQVTGIPCFPDIPKHYRHKKTILDW* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00207 582 PANTHER PECTINESTERASE 22 559 - -
Phac5g00207 582 Pfam Pectinesterase 256 554 IPR000070 GO:0030599|GO:0042545
Phac5g00207 582 CDD PMEI-like_3 62 211 - -
Phac5g00207 582 SMART PMEI_2 55 207 IPR006501 GO:0004857
Phac5g00207 582 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Phac5g00207 582 NCBIfam pectinesterase inhibitor domain 55 211 IPR006501 GO:0004857
Phac5g00207 582 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 211 IPR035513 -
Phac5g00207 582 ProSitePatterns Pectinesterase signature 1. 281 300 IPR018040 -
Phac5g00207 582 Gene3D - 254 569 IPR012334 -
Phac5g00207 582 FunFam Pectinesterase 251 569 - -
Phac5g00207 582 FunFam Pectinesterase 56 212 - -
Phac5g00207 582 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 212 IPR035513 -
Phac5g00207 582 Pfam Plant invertase/pectin methylesterase inhibitor 59 207 IPR006501 GO:0004857
Phac5g00207 582 SUPERFAMILY Pectin lyase-like 254 566 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00207 Phac-Chr5 1616326 1619022 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00207 5 564 Carbohydrate Esterase AT3G05610 49.291 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00207 K01051 - gmx:100776244 999.193