Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00206 ATGGCAACAAGAATCCCAAGATTTGTTGGCTTCTTCATGACCCTTTTCACCATGGCAAGTGCACAATCTCTGAACTATGTGAATGATGACTGCCACAACTCAACAACAAAAGAACAAGCCCTAACCCTAACATTCAGAACCAACCTTAACAGCACCCTCTCAAGGCTCTCTTCTGATGCTGCAACAAGCAAGGGTTACAACCACACCTCCACAGGAAATGGCAGCACACCGGTTGATGATGATGCTGTGTATGGCCTCTATGACTGCAGGGGTGATGTCACAGGACCCTTCTGCCAGTTCTGTGTCTCCACTGCAGCCTCAGAGATTCTCCAGCAATGCCCTAACAGATCCTCTGCTGTGATATGGTACAACTACTGCATTCTCAGGTACTCAAACCACAACTTCTTTGGGAACCTTACCACAACCCCATCATGGGAAATTGTGGAGCCCAAGAACAGCACTGACCCAGAAGAGCTTCAGAAAGCTGAGAGCTACATGCAAAGCTTGAAGAGAGAAGCCACTGTGGAGAGCAACAAGTTGTATGCAATGGGAGGGTTCAATTTGAGTGATGGTGAGGAAAGGTATGGGTTGGTGCAGTGCAGTAGGGACCTCACCAATGATGAGTGCAGCCAGTGTTTGGAGGCCATGATACAAAAAGTTCCTCAGTGTTGTGGTACAAAGAGATCATGGCAGGTTTTGGCTCCAAGTTGCCTTATAAAGTATGATGATTTCATGTTCTACCAGATTACAGATCAAACTTCTTCTCCTTTGCCTAATCCAGCTAAGAAGGGAGGTTCCATTGGCTCAAAAACATTGATCATAATCATTGTGAGTGTATTAGTGGCACTGATTTTTCTTTGTTGCTCTATCTACTACTTGTGGAGGAAGTATCTGACAAATAAAGATGAATTGATATCAGTGAACACCCCCAGATCTTTTCATGGCTATGTTCAAAGAGAAGAACCACTGAATGCAGACCTTCCAACAATCCCTTTAATCTGGATTCAACAGAGCACTAATTACTTTTCAGAGTTCTCTAAATTGGGAGAAGGTGGATTTGGTCCTGTTTATAAGGGTAATTTAGAAGATGGAACAGAAGTTGCTGTCAAAAGACTCTCTAAGGCATCAGGTCAAGGTTTGGAGGAGTTCAAGAATGAAGTGATCTTCATAGCCAAACTGCAACATAGGAACCTTGTGAGACTCTTGGGGTGCTGCATTGAGGAAAATGAAAAGCTGCTTGTCTATGAGTACATGCCAAATTCTAGCCTTGACTCTCATCTGTTCAATGAGGAGAAAAGAAGGCAACTAGATTGGAAGTTAAGACTGAGCATTATCAATGGAATTGCAAAAGGACTTCTGTATCTTCATGAAGACTCTAGACTTAGAATAATACATAGAGATCTGAAAGCCAGCAATGTACTTTTGGATCAAGAGATGAATCCAAAAATATCAGATTTTGGATTGGCAAGAACATTTGAAAAAGGCCAGAGTCAAGAAAGTACAAGGAGAGTTATGGGCACCTATGGATACATGGCTCCAGAATATGCTATGGAAGGATTGTATTCAGTAAAATCTGATGTCTTCAGCTTTGGAGTTCTTCTGTTAGAAATCATATGTGGGAAAAGGAATAGTGGATTCCATCTTTCAGAACATGGTCAAAGCCTTCTTGTACATAGTTGGAGACTTTGGGGTGAAGGAAAAGGCTTGGAAATGTTAGATCCAATGCTGGAAAAGACATACAAAGGCAGTGAAGTTATGAAATGCATACACATTGGTTTGTTGTGTGTTCAAGAAGATGCAGCTGATAGACCAACCATGTCCACAGTTGTTGTGATGCTGGCAAGTGACACAATGGCACTTCCCAACCCTAATCATCCTGCATTTTCAGTTGGAAGGAAGACCAAGGAAGAAGAATCAACTTCAAAAGGATCCAAGGATCCTTCTGTTAATGATTTAACAATATCAAACATTTTACCAAGGTAG 1983 0.4206 MATRIPRFVGFFMTLFTMASAQSLNYVNDDCHNSTTKEQALTLTFRTNLNSTLSRLSSDAATSKGYNHTSTGNGSTPVDDDAVYGLYDCRGDVTGPFCQFCVSTAASEILQQCPNRSSAVIWYNYCILRYSNHNFFGNLTTTPSWEIVEPKNSTDPEELQKAESYMQSLKREATVESNKLYAMGGFNLSDGEERYGLVQCSRDLTNDECSQCLEAMIQKVPQCCGTKRSWQVLAPSCLIKYDDFMFYQITDQTSSPLPNPAKKGGSIGSKTLIIIIVSVLVALIFLCCSIYYLWRKYLTNKDELISVNTPRSFHGYVQREEPLNADLPTIPLIWIQQSTNYFSEFSKLGEGGFGPVYKGNLEDGTEVAVKRLSKASGQGLEEFKNEVIFIAKLQHRNLVRLLGCCIEENEKLLVYEYMPNSSLDSHLFNEEKRRQLDWKLRLSIINGIAKGLLYLHEDSRLRIIHRDLKASNVLLDQEMNPKISDFGLARTFEKGQSQESTRRVMGTYGYMAPEYAMEGLYSVKSDVFSFGVLLLEIICGKRNSGFHLSEHGQSLLVHSWRLWGEGKGLEMLDPMLEKTYKGSEVMKCIHIGLLCVQEDAADRPTMSTVVVMLASDTMALPNPNHPAFSVGRKTKEEESTSKGSKDPSVNDLTISNILPR* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00206 660 SMART serkin_6 342 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g00206 660 ProSiteProfiles Gnk2-homologous domain profile. 141 246 IPR002902 -
Phac5g00206 660 FunFam Cysteine-rich receptor-like protein kinase 10 144 246 - -
Phac5g00206 660 Pfam Salt stress response/antifungal 161 242 IPR002902 -
Phac5g00206 660 Pfam Salt stress response/antifungal 31 132 IPR002902 -
Phac5g00206 660 FunFam Cysteine-rich receptor-like protein kinase 28 27 134 - -
Phac5g00206 660 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 31 656 - -
Phac5g00206 660 CDD STKc_IRAK 348 613 - -
Phac5g00206 660 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 310 417 - -
Phac5g00206 660 Pfam Protein tyrosine and serine/threonine kinase 346 612 IPR001245 GO:0004672|GO:0006468
Phac5g00206 660 MobiDBLite consensus disorder prediction 645 660 - -
Phac5g00206 660 ProSiteProfiles Protein kinase domain profile. 342 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g00206 660 Gene3D - 23 135 IPR038408 -
Phac5g00206 660 Gene3D - 144 246 IPR038408 -
Phac5g00206 660 Gene3D Phosphorylase Kinase; domain 1 309 417 - -
Phac5g00206 660 Pfam Domain of unknown function (DUF3403) 615 660 IPR021820 GO:0004674
Phac5g00206 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Phac5g00206 660 MobiDBLite consensus disorder prediction 630 644 - -
Phac5g00206 660 MobiDBLite consensus disorder prediction 623 660 - -
Phac5g00206 660 ProSiteProfiles Gnk2-homologous domain profile. 25 135 IPR002902 -
Phac5g00206 660 FunFam Liguleless narrow1 418 621 - -
Phac5g00206 660 SUPERFAMILY Protein kinase-like (PK-like) 327 630 IPR011009 -
Phac5g00206 660 Gene3D Transferase(Phosphotransferase) domain 1 418 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00206 Phac-Chr5 1609053 1614258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00206 9 660 Receptor kinase-like Gene Family AT4G05200 42.375 1.20e-175 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac5g00206 PK_Tyr_Ser-Thr 7.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00206 - - mtr:25490357 907.901