Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00205 ATGGCAACAAGAATCCCAAGATTTGTTGGCTTCTTCATGACCCTTTTCACCATGGCAAGTGCACAATCTCTGAACTATGTGAATGATGACTGCCACAACTCAACAACAAAAGAACAAGCCCTAACCCTAACATTCAGAACCAACCTTAACAGCACCCTCTCAAGGCTCTCTTCTGATGCTGCAACAAGCAAGGGTTACAACCACACCTCCACAGGAAATGGCAGCACACCGGTTGATGATGATGCTGTGTATGGCCTCTATGACTGCAGGGGTGATGTCACAGGACCCTTCTGCCAGTTCTGTGTCTCCACTGCAGCCTCAGAGATTCTCCAGCAATGCCCTAACAGATCCTCTGCTGTGATATGGTACAACTACTGCATTCTCAGGTACTCAAACCACAACTTCTTTGGGAACCTTACCACAACCCCATCATGGGAAATTGTGGAGCCCAAGAACAGCACTGACCCAGAAGAGCTTCAGAAAGCTGAGAGCTACATGCAAAGCTTGAAGAGAGAAGCCACTGTGGAGAGCAACAAGTTGTATGCAATGGGAGGGTTCAATTTGAGTGATGGTGAGGAAAGGTATGGGTTGGTGCAGTGCAGTAGGGACCTCACCAATGATGAGTGCAGCCAGTGTTTGGAGGCCATGATACAAAAAGTTCCTCAGTGTTGTGGTACAAAGAGATCATGGCAGGTTTTGGCTCCAAGTTGCCTTATAAAGTATGATGATTTCATGTTCTACCAGATTACAGATCAAACTTCTTCTCCTTTGCCTAATCCAGCTAAGAAGGGAGGTTCCATTGGCTCAAAAACATTGATCATAATCATTGTGAGTGTATTAGTGGCACTGATTTTTCTTTGTTGCTCTATCTACTACTTGTGGAGGAAGTATCTGACAAATAAAGATGAATTGATATCAGTGAACACCCCCAGATCTTTTCATGGCTATGTTCAAAGAGAAGAACCACTGAATGCAGACCTTCCAACAATCCCTTTAATCTGGATTCAACAGAGCACTAATTACTTTTCAGAGTTCTCTAAATTGGGAGAAGGTGGATTTGGTCCTGTTTATAAGGGTAATTTAGAAGATGGAACAGAAGTTGCTGTCAAAAGACTCTCTAAGGCATCAGGTCAAGGTTTGGAGGAGTTCAAGAATGAAGTGATCTTCATAGCCAAACTGCAACATAGGAACCTTGTGAGACTCTTGGGGTGCTGCATTGAGGAAAATGAAAAGCTGCTTGTCTATGAGTACATGCCAAATTCTAGCCTTGACTCTCATCTGTTCAATGAGGAGAAAAGAAGGCAACTAGATTGGAAGTTAAGACTGAGCATTATCAATGGAATTGCAAAAGGACTTCTGTATCTTCATGAAGACTCTAGACTTAGAATAATACATAGAGATCTGAAAGCCAGCAATGTACTTTTGGATCAAGAGATGAATCCAAAAATATCAGATTTTGGATTGGCAAGAACATTTGAAAAAGGCCAGAGTCAAGAAAGTACAAGGAGAGTTATGGGCACCTAG 1524 0.4285 MATRIPRFVGFFMTLFTMASAQSLNYVNDDCHNSTTKEQALTLTFRTNLNSTLSRLSSDAATSKGYNHTSTGNGSTPVDDDAVYGLYDCRGDVTGPFCQFCVSTAASEILQQCPNRSSAVIWYNYCILRYSNHNFFGNLTTTPSWEIVEPKNSTDPEELQKAESYMQSLKREATVESNKLYAMGGFNLSDGEERYGLVQCSRDLTNDECSQCLEAMIQKVPQCCGTKRSWQVLAPSCLIKYDDFMFYQITDQTSSPLPNPAKKGGSIGSKTLIIIIVSVLVALIFLCCSIYYLWRKYLTNKDELISVNTPRSFHGYVQREEPLNADLPTIPLIWIQQSTNYFSEFSKLGEGGFGPVYKGNLEDGTEVAVKRLSKASGQGLEEFKNEVIFIAKLQHRNLVRLLGCCIEENEKLLVYEYMPNSSLDSHLFNEEKRRQLDWKLRLSIINGIAKGLLYLHEDSRLRIIHRDLKASNVLLDQEMNPKISDFGLARTFEKGQSQESTRRVMGT* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00205 507 ProSiteProfiles Gnk2-homologous domain profile. 141 246 IPR002902 -
Phac5g00205 507 Gene3D - 23 135 IPR038408 -
Phac5g00205 507 Gene3D - 144 246 IPR038408 -
Phac5g00205 507 Pfam Protein tyrosine and serine/threonine kinase 346 499 IPR001245 GO:0004672|GO:0006468
Phac5g00205 507 FunFam Cysteine-rich receptor-like protein kinase 28 27 134 - -
Phac5g00205 507 ProSiteProfiles Protein kinase domain profile. 342 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g00205 507 Gene3D Transferase(Phosphotransferase) domain 1 418 507 - -
Phac5g00205 507 FunFam Cysteine-rich receptor-like protein kinase 10 144 246 - -
Phac5g00205 507 Pfam Salt stress response/antifungal 31 132 IPR002902 -
Phac5g00205 507 Pfam Salt stress response/antifungal 161 242 IPR002902 -
Phac5g00205 507 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 31 507 - -
Phac5g00205 507 SUPERFAMILY Protein kinase-like (PK-like) 326 507 IPR011009 -
Phac5g00205 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Phac5g00205 507 SMART serkin_6 342 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g00205 507 ProSiteProfiles Gnk2-homologous domain profile. 25 135 IPR002902 -
Phac5g00205 507 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 418 507 - -
Phac5g00205 507 Gene3D Phosphorylase Kinase; domain 1 309 417 - -
Phac5g00205 507 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 310 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00205 Phac-Chr5 1609053 1614258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00205 9 507 Receptor kinase-like Gene Family AT4G05200 41.892 9.43e-123 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac5g00205 PK_Tyr_Ser-Thr 7.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00205 - - lja:Lj0g3v0351729.1 756.903