Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00196 ATGACTACAGAAACTCAGAGGGTAGTGGTGATCCAGGATGCATCAAGAGGTGTTAGTTCAAAGGCTATCCTTGGAGCCCTGGAAAAGTTTTCTGTTAAAGCTGGAGATCAGCTTATAATTGTTGCTATCCTTGATTGGATTAGCAGTCCCAGTATGTTTTCTTTTCTTCCAAGAAAGCCTATGGGTTACATGGTCAGACTTGATACCAGCTCAACAAACCAGAAAATAATTGCAAAATGGCATACCAAAAAAAAGAAAGAATATCTTATGAACGAGAAGATCAAGGAGATCTCCAACTACTGTAAATCGAATGAGATTGGATTCCAGATTGAAGTGCTTGTAGGCCCTACTGCAGAAGTTGCTTCTAATGCTGCCAAGGATTTTCAGGCGACAACTTTGATTTTATTTAGACAGATCCACAAAGATTTGAAGTATTTCATGCGCCAGCATCCTTGTGGCATGTATAGGATAACAAGTGACAATTCACTTGAGAGGTTGAAAGATCCAAAATCAACAGTCAGCACCAAATCACTTGTTGACAGGCAAGAAAATGTAAGCTATAAAGAAATGTTTCCAGGAAGTGAAGAGGAAGAACGTTCTCTTCAGATGTCCAGGTCTTCATCAAGTGATATGTTGACATCAATTGGAGTCTCAAGTCAGTGGAGTACAGAACTCTCCACTTCTAGTTTCAGAAGCTTGCGGTATGGCCAGCAATACCAAGAGGGAAATCTCTATTCAAATATAGAACAAGAAACAGCAGGGAACCAATCACTATTTCACATTTCAGAGAATGAAGAAATTGACCAATTGGAACAAAATAAAAGAGAGAACTACGGTAGAAATAATGAAAAATCTCATATGGAGGAAGAATTTGCAAATCCACTTTGTTCTGTGTGCAATAATAGACGACCAAAAGTTGGATTGAAGAGAGATTTCACTTATGCAGAGCTCTTTGCTGCTACAAAAGGATTTTCTCCCAAGAACTTTCTGTCAGAAGGAGGATTTGGATCTGTCTACAAAGGACTGCTTAATGGAATGAAGATTGCTGTTAAGCAGCATAAAAATGCAGGCTTCCAAGGAGAGAAGGAATTTAAGTCAGAAGTGAATGTACTTAGCAAAGCAAGACATGAGAATGTGGTTGTGCTGCTAGGTTCTTGCTCAGAAGGAACTAATAGGCTTCTTGTGTATGAATATGTTTGCAATGGCTCACTTGACCAACATCTATCAGAACACTCTCGGTCACCTCTTAGTTGGGAAGATAGGATCAATATAGCAATAGGAGCTGCCAAAGGGTTACTATACTTACACAAGAACAACATGATACACAGAGATGTGAGACCAAACAATATCCTTATAACACATGATCATCGACCATTGCTAGGAGACTTTGGATTAGCAAGAAATCAAAATGAAGACTCAATACACTCAACAGAAGTTGTTGGAACTTTGGGGTATTTGGCACCAGAATATGCTGAACATGGGAAAGTGTCCAGCAAAACAGATGTATACTCTTTTGGAGTGGTTTTACTACAGCTAATAACAGGAATGAGAACTACAGATAAAAGACTTGAAGGAAGAAGTCTTGTGGGCTGGGCAAGGCCACTTTTAAGAGAGAGGAACTATCCAGATTTAATTGATGAAAGGATCATTCAGTCTCACGATGTCCATCAACTATTTTGGATGGTTCGAATAGCAGAGAAATGTCTAAGCAGGGAGCCTCAAAGGAGACTAAATATGATTCAGGTTGTTGATGCTTTGACTGACATAGTGGAAGGCAGAACATGTGACATCATATTAAGAGATTACTCCCCTGCAAGATCAGATTCGAATTATACTGCATCAGACTCTGATGAATCTGAAGATGAAATGAAGGAATCCTTCAACTTTGAAGATGAATTAATAGCTCACAGCCACAGTTCAGAATCCATAGATAGTAATAGCATAAGTCTGATGATGCACATGAATTTAAGACAGCCACCATCCCCTCCAATTCAGAGCATCCCTCTACGTAGCTCATGCTTTCATGATGAGTCAACTAGTGATGGTGAAGCAATGGAAATTTCAAAATCCAATGAGCACATGAGCAACCATGAAACACACCAAAAGGTTGCACAATCTGTTTGCTCTGTGTGCCATAACAGAAGACCACAGTTTGAAAGGAACAGAAAAAGAGAGTTTTCATATGTTGAGTTGTCTGCAGCCACACAAGGTTTTTCCCCTAAGAACTTTCTGTCAGAAGGGGGGTTTGGTTCTGTGTATAAAGGGGAGTTGTGTGGACAGAAGATTGCTGTTAAGCAACACATGTGTGCAAACCGAAAAGGAGAGAAGGAATTCAAGTCTGAAGTTGATGCACTCAGCAAAGCAATATATGAGAATGTGGTGATGCTGTTAGGATCATGCTCAGAAGGGAACCATAGACTTCTTGTGTATGAATATGTCTGCAATGGTTCCTTGGACCAACATTTATCACGGGACTTTGGTTTGGCTAGAACTGTGATTGAAGACTCCTCATACTCTACAGAGTGTGTTGGGAATCTGCCTTATATGGCACCAGAATATGCGGAATTTGGAAAAGTGTCAATTAAGACTGATGTGTATTCCTTTGGGGTGGTTCTGCTACAGCTAATAACAGGAATGAGGACCACAGACAAAAGAGTTGCTGATAAAGGTCTGGTGGGATGGGCAAGGCTACTTTTAAGAGAGAGGAACTATCCAGATTTAATTGATGAAAGGATCATTCAGTCTCACGATGTCCATCAACTATTTTGGATGGTTCGAATAGCAGAGAAATGTCTAAGCAGGGAGCCTCAAAGGAGACTAAATATGATTCAGGTTGTTGATGCTTTGACTGACATAGTGGAAGGCAGAACATGTGACATCATATTAAGAGATTACTCCCTTGCAAGATCATATTCAATTTATACTGCATCAGACTCTGATGAATCTGAAGATGAAATGAAGGAATCCTTCAACTTTGAAGATGAATTAATAGCTCACAGCCACAGTTCAGAATCCATAGATAGTAATAGCATAAGTCTGATGATGCACATGAATTTAAGACAGCCACCATCCCCTCCAATTCAGAGCATCCCTCTAAGTAGCTCATGCTCGTATAAGTTTCATGATGAGTCAACTAGTGATGGTGAAGCAATGGAAATTTCAAAATCCAATGAGAATCCTTGA 3183 0.3977 MTTETQRVVVIQDASRGVSSKAILGALEKFSVKAGDQLIIVAILDWISSPSMFSFLPRKPMGYMVRLDTSSTNQKIIAKWHTKKKKEYLMNEKIKEISNYCKSNEIGFQIEVLVGPTAEVASNAAKDFQATTLILFRQIHKDLKYFMRQHPCGMYRITSDNSLERLKDPKSTVSTKSLVDRQENVSYKEMFPGSEEEERSLQMSRSSSSDMLTSIGVSSQWSTELSTSSFRSLRYGQQYQEGNLYSNIEQETAGNQSLFHISENEEIDQLEQNKRENYGRNNEKSHMEEEFANPLCSVCNNRRPKVGLKRDFTYAELFAATKGFSPKNFLSEGGFGSVYKGLLNGMKIAVKQHKNAGFQGEKEFKSEVNVLSKARHENVVVLLGSCSEGTNRLLVYEYVCNGSLDQHLSEHSRSPLSWEDRINIAIGAAKGLLYLHKNNMIHRDVRPNNILITHDHRPLLGDFGLARNQNEDSIHSTEVVGTLGYLAPEYAEHGKVSSKTDVYSFGVVLLQLITGMRTTDKRLEGRSLVGWARPLLRERNYPDLIDERIIQSHDVHQLFWMVRIAEKCLSREPQRRLNMIQVVDALTDIVEGRTCDIILRDYSPARSDSNYTASDSDESEDEMKESFNFEDELIAHSHSSESIDSNSISLMMHMNLRQPPSPPIQSIPLRSSCFHDESTSDGEAMEISKSNEHMSNHETHQKVAQSVCSVCHNRRPQFERNRKREFSYVELSAATQGFSPKNFLSEGGFGSVYKGELCGQKIAVKQHMCANRKGEKEFKSEVDALSKAIYENVVMLLGSCSEGNHRLLVYEYVCNGSLDQHLSRDFGLARTVIEDSSYSTECVGNLPYMAPEYAEFGKVSIKTDVYSFGVVLLQLITGMRTTDKRVADKGLVGWARLLLRERNYPDLIDERIIQSHDVHQLFWMVRIAEKCLSREPQRRLNMIQVVDALTDIVEGRTCDIILRDYSLARSYSIYTASDSDESEDEMKESFNFEDELIAHSHSSESIDSNSISLMMHMNLRQPPSPPIQSIPLSSSCSYKFHDESTSDGEAMEISKSNENP* 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00196 1060 Gene3D Transferase(Phosphotransferase) domain 1 813 963 - -
Phac5g00196 1060 Gene3D Transferase(Phosphotransferase) domain 1 399 599 - -
Phac5g00196 1060 FunFam Proline-rich receptor-like protein kinase PERK8 286 398 - -
Phac5g00196 1060 SUPERFAMILY Protein kinase-like (PK-like) 310 601 IPR011009 -
Phac5g00196 1060 Pfam Protein tyrosine and serine/threonine kinase 743 824 IPR001245 GO:0004672|GO:0006468
Phac5g00196 1060 Pfam Protein tyrosine and serine/threonine kinase 329 585 IPR001245 GO:0004672|GO:0006468
Phac5g00196 1060 Pfam Protein tyrosine and serine/threonine kinase 825 947 IPR001245 GO:0004672|GO:0006468
Phac5g00196 1060 SUPERFAMILY Protein kinase-like (PK-like) 724 965 IPR011009 -
Phac5g00196 1060 FunFam Proline-rich receptor-like protein kinase PERK8 698 812 - -
Phac5g00196 1060 ProSitePatterns Tyrosine protein kinases specific active-site signature. 440 452 IPR008266 GO:0004672|GO:0006468
Phac5g00196 1060 ProSiteProfiles Protein kinase domain profile. 324 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g00196 1060 Gene3D Phosphorylase Kinase; domain 1 708 812 - -
Phac5g00196 1060 Gene3D Phosphorylase Kinase; domain 1 297 398 - -
Phac5g00196 1060 SMART tyrkin_6 324 586 IPR020635 GO:0004713|GO:0006468
Phac5g00196 1060 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 399 601 - -
Phac5g00196 1060 PANTHER OS01G0253100 PROTEIN 211 590 - -
Phac5g00196 1060 MobiDBLite consensus disorder prediction 1019 1060 - -
Phac5g00196 1060 ProSiteProfiles Protein kinase domain profile. 738 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00196 Phac-Chr5 1538401 1551224 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00196 822 955 Trihelix Transcription Factor Family AT5G38560 40.940 7.13e-22 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Phac5g00196 PK_Tyr_Ser-Thr 4.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00196 - - gmx:100794450 1070.84