Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00184 ATGAGTCAAATGACACATGACATTGATGACAATGTGCATGGTGAGGATCAGACTGGGTCACAGTTGAACGATGAGGGTAATGGAGGAGGTGTTGTTCTGAAGAAAGGACCATGGACAGCTGCTGAAGATGTTATTTTGGTGGACTATGTCAATAAGCATGGAGAGGGGAATTGGAATGCAGTTCAGAAGTATTCAGGCCTTTCTCGTTGTGGAAAAAGTTGCCGATTGCGATGGGCCAATCACCTAAGGCCAAACTTAAAGAAAGGCGCATTTACTGCAGAAGAGGAGCAGATGATTGCTGAACTCCATGCCAAAATGGGAAACAAATGGGCACGCATGGCAGCACATTTGCCTGGTCGTACAGATAACGAAATAAAAAACTACTGGAACACCCGGATGAAGAGGCGTCAACGGGCTGGCTTGCCACTTTATCCTCCTGAAATAGTTATGCAAGCATTTCAAGATAGTAAGCATGGCCAAGGTACTGGTGAAATCAATGATGGAGATGGATGCCACCATGATTTCATGGAGAAAAACAATTATGAGATGCATGATGCAATATTTGACAGTCTGAAGGAAAATCAGGGAATCTTACCTTTTGTGCCTGAGCTTTCTGATATTTCTGCTAATAGCATTCTGCCAAATGTTCTTGGTTCTCCTCCATACTGTAATTTCCTGCCATCGACATTACCTAATCATGATCATCTTCAAGAGACATCAGTGTCTTTTATTGGTTCCAGTGAATTGAACACTAATGGGTTTTATCCATTCAACCACTTTAAGGATAATACTTCTGATAAGATTGCAGAATCATTTGGATTGCATTCTCCCCTTGATCATGGTGCCTCCTCATATGGCTCCATTTGTTACAGCCATTCATTATCGAATGACAATTACTCTACTTCTAAGCCGACTTCTGAGGCTGTGAAGTCAGAGCTCCCTTCACTCCAATATCCAGAAACTGAATTTGTTAGCTGGGGTACCTCTCCCCCGCCTCCATTGAATGAATCTATTGATGTTTTAATTCATTCTCCTCAACCACCTTATGCACTAGACTCAGGTTCTTCGCCACTCAGTTGTTGCTTCCTTAATGAATTTCTTTATCAGCAGGCGAAGGCTTTTAGTTATTCAAAGAATAATTGGTCTGACAAGAGCTCAAGTTCATCCATTGCAACTCCCGTTGACAGAGCTGAGAGCTCGGCTTTGAATATGTACGAGACAGAGTGGGAGGATTATGCTGACCCTGTATCTCCCTTTGGTGCAACTTCAATCCTTAATGAGCATCCTGTTGTTGGCACCAATGGAAAGTCGTGGGATGGATGGGAACCTTTTCAGAACTTTAGTGGTTAG 1350 0.4281 MSQMTHDIDDNVHGEDQTGSQLNDEGNGGGVVLKKGPWTAAEDVILVDYVNKHGEGNWNAVQKYSGLSRCGKSCRLRWANHLRPNLKKGAFTAEEEQMIAELHAKMGNKWARMAAHLPGRTDNEIKNYWNTRMKRRQRAGLPLYPPEIVMQAFQDSKHGQGTGEINDGDGCHHDFMEKNNYEMHDAIFDSLKENQGILPFVPELSDISANSILPNVLGSPPYCNFLPSTLPNHDHLQETSVSFIGSSELNTNGFYPFNHFKDNTSDKIAESFGLHSPLDHGASSYGSICYSHSLSNDNYSTSKPTSEAVKSELPSLQYPETEFVSWGTSPPPPLNESIDVLIHSPQPPYALDSGSSPLSCCFLNEFLYQQAKAFSYSKNNWSDKSSSSSIATPVDRAESSALNMYETEWEDYADPVSPFGATSILNEHPVVGTNGKSWDGWEPFQNFSG* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00184 449 FunFam Transcription factor GAMYB 90 136 - -
Phac5g00184 449 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 137 IPR017930 -
Phac5g00184 449 Gene3D - 90 136 - -
Phac5g00184 449 ProSiteProfiles Myb-like domain profile. 33 82 IPR001005 -
Phac5g00184 449 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 7 423 - -
Phac5g00184 449 Pfam Myb-like DNA-binding domain 35 82 IPR001005 -
Phac5g00184 449 Pfam Myb-like DNA-binding domain 88 131 IPR001005 -
Phac5g00184 449 FunFam MYB-related transcription factor 34 87 - -
Phac5g00184 449 MobiDBLite consensus disorder prediction 1 33 - -
Phac5g00184 449 Gene3D - 34 87 - -
Phac5g00184 449 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 82 IPR017930 -
Phac5g00184 449 ProSiteProfiles Myb-like domain profile. 83 133 IPR001005 -
Phac5g00184 449 SUPERFAMILY Homeodomain-like 34 129 IPR009057 -
Phac5g00184 449 CDD SANT 37 82 IPR001005 -
Phac5g00184 449 SMART sant 87 135 IPR001005 -
Phac5g00184 449 SMART sant 34 84 IPR001005 -
Phac5g00184 449 CDD SANT 90 131 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00184 Phac-Chr5 1520628 1525278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00184 4 419 MYB Transcription Factor Family AT5G06100 43.056 8.23e-100 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac5g00184 Myb_DNA-binding 7.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00184 K09422 - gmx:100805804 763.451