Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00176 ATGTCATCCTTCAAATCCTATGGGAAAGTTGATGAGCATGAGCAAAGGGTGTTGGAGACAAGGAGGAAAACCAGGAAGAGAATCACAATCATAGGGTTGTCCTCAATAGTTCTAGCAGGTGTTGTTTTTGCTGCTGTATTTGGCATTCTTGGCAGCACCAACTCCTCAGAAGGTACCAATGATGCTCACACTGTGACAAATTCAGTGAAGGCTGTTTGTGATGTGACATTGTACAAGGACTCGTGCTATAGCAGCCTTGGTTCTGCTGTGGACTCAGGGCAGCTTCAGCCTCAGGAGCTGTTCATGTTGTCAATGAAGGTGGCCTTATCTGAAGTGTCCAAAGCTGCTGATTATCTCAGTGATCATGGAGTTTTCAATGGGGTGGTGAAGGACAACAGGACTAAGGAGGCTTTCAAAAATTGCAGGGAGCTTTTGGATCTTGCGGTTGACCATCTGAATAGCTCTTTGACATCAGGAGAAAAGTTTTCTCTTCTTGAAGTTTTTGATGATCTAGAAACATGGTTAAGTGCTGCAGGTACATACCAGCAGACTTGTATTGAAGGATTTGAAGATGGAAAAGAAGCAATTAAGACAAGTGTAGTGAGCTATCTTAAAAATTCTACACAGTTCACCAGTAACAGTCTTGCCATCATTACATGGATCAATAAGGCTGCAACCACACTGAACCTTAGGCGCTTACTGAGTTTACCTCATCAGAATGAAGCACCAGTGTGGCTTCCTTCAAAAGATAGGAGGCTCCTTCTGACAGAGGATTTGAGGAAGAAAGCTGACATTGTTGTGGCCAAAGACGGTAGTGGGAAGTATAAGAAAATTTCTGATGCACTTAAACATGTTCCTAATGAGAGTAACAAGAGGACTGTGATCTATGTGAAGAGAGGGGTTTACTATGAAAATGTGAGGGTTGAGAAGGCCAAGTGGAATGTGATGATCATTGGTGATGGAATGACTTCAACTATTGTATCTGCTAGCCTTAACTTTGTGGATGGCACACCAACATTTTCAACAGCAACATTTGCTGTATTTGGAAGGAATTTCATAGCTAGAGATATTGGTTTTCGGAACACTGCTGGTCCACAGAAGCATCAAGCAGTAGCACTAATGACAAGTGCTGATCAAGCAGTTTATTATAGGTGCCACATTGATGCATTTCAGGATACTCTCTATGCTCATTCCAACCGTCAATTCTACAGAGAATGCAACATCTATGGCACTGTTGATTTCATTTTTGGAAATTCTGCTGTTGTGATCCAAAACTGTAATATTAGGCCAAAGTTGCCAATGCATGGCCAGCAAAACACAATCACAGCTCAGGGAAAAACTGACCCTAACATGAACACTGGGATCTCCATTCAGAATTGCAGCATTTCACCCTTTGGTAACTTGAGTTCTGTCCAGACATATCTTGGAAGACCCTGGAAGAACTACTCAACCACAGTTTACATGAAATCCAGAATGGATGGTTTTGTGAACCCCAAAGGCTGGTTACCATGGACAGGGAACTCTGCTCCAAACACCATTTTCTATGCAGAATTTCAGAATGTTGGACCAGGTGCTTCAACAAAGAATAGGGTGAAGTGGAAGGGTTTGAGAACCATTAACAGAGTACAAGCCAGCAAGTTTACCATCAAGGGTTTTCTACATGGAGAGAAATGGATTTCTGCAGCAGGTGCCCCATTTAAGTCTGATCTATGA 1713 0.4244 MSSFKSYGKVDEHEQRVLETRRKTRKRITIIGLSSIVLAGVVFAAVFGILGSTNSSEGTNDAHTVTNSVKAVCDVTLYKDSCYSSLGSAVDSGQLQPQELFMLSMKVALSEVSKAADYLSDHGVFNGVVKDNRTKEAFKNCRELLDLAVDHLNSSLTSGEKFSLLEVFDDLETWLSAAGTYQQTCIEGFEDGKEAIKTSVVSYLKNSTQFTSNSLAIITWINKAATTLNLRRLLSLPHQNEAPVWLPSKDRRLLLTEDLRKKADIVVAKDGSGKYKKISDALKHVPNESNKRTVIYVKRGVYYENVRVEKAKWNVMIIGDGMTSTIVSASLNFVDGTPTFSTATFAVFGRNFIARDIGFRNTAGPQKHQAVALMTSADQAVYYRCHIDAFQDTLYAHSNRQFYRECNIYGTVDFIFGNSAVVIQNCNIRPKLPMHGQQNTITAQGKTDPNMNTGISIQNCSISPFGNLSSVQTYLGRPWKNYSTTVYMKSRMDGFVNPKGWLPWTGNSAPNTIFYAEFQNVGPGASTKNRVKWKGLRTINRVQASKFTIKGFLHGEKWISAAGAPFKSDL* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00176 570 CDD PMEI-like_3 71 223 - -
Phac5g00176 570 ProSitePatterns Pectinesterase signature 2. 408 417 IPR033131 -
Phac5g00176 570 Pfam Pectinesterase 264 555 IPR000070 GO:0030599|GO:0042545
Phac5g00176 570 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 67 221 IPR035513 -
Phac5g00176 570 PANTHER PECTINESTERASE 39 560 - -
Phac5g00176 570 SUPERFAMILY Pectin lyase-like 262 567 IPR011050 -
Phac5g00176 570 Gene3D - 259 570 IPR012334 -
Phac5g00176 570 Pfam Plant invertase/pectin methylesterase inhibitor 68 217 IPR006501 GO:0004857
Phac5g00176 570 Gene3D Invertase/pectin methylesterase inhibitor family protein 65 222 IPR035513 -
Phac5g00176 570 NCBIfam pectinesterase inhibitor domain 47 221 IPR006501 GO:0004857
Phac5g00176 570 FunFam Pectinesterase 65 222 - -
Phac5g00176 570 FunFam Pectinesterase 258 570 - -
Phac5g00176 570 SMART PMEI_2 64 217 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00176 Phac-Chr5 1380306 1382625 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00176 7 570 Carbohydrate Esterase AT3G10710 56.942 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00176 - - gmx:100811152 999.964