Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00175 ATGTCTTCACCATCATTTTTTCTTCTCTTTCTCTTCTTTCTCTTAGCTCCATCACTCTTAGCTCAATCTCCACCACCTTCTCCTTCTTCTTCTTCTTCTTCTTCTGCTGTTGCTGCTGCTACTTGCAAAGCCACACTATATCCAAAGCTATGCCGTTCCATTCTCTCAGCCATTCGTGCCTCCCCTTCTGACCCTTATGGCTATGGCAAGTTCTCCATCAAGCAAAGCCTCAAACAGGCTCATAAACTGGCCAAGGTGTTTGAGGACTTTCTGCAACGCCACCAATCATCTTCTTCCCTCAACCATGCAGAAGTTGCATCCCTTGTTGACTGCAGAGACCTCAACAACCTCAACGTGGACTACTTGGGATCCATATCAGAGGAGCTCAAATCTGCAGCTTCCTCAGACTCTGAGGTGGTTCAGAAAATTGAGAGCTATCTCAGTGCTGTGGCCACCAACCACTACACCTGCTATGATGGGTTGGTGGTGACCAAAAGCACCATTGCCAATGCCCTTGCCCTGCCACTGAAGGGTGCCACCCAGTTGTACAGTGTCTCACTTGGGTTGGTCACGGAGGCTCTCGACAAGAATCTCAGAAGAAGCAAGACCCGCAAACATGGACTCCCCACCCCCACCTTCAAGGTTAGGCAACCACTCGAGAAGCTCATCAAGCTTCTTCGCACAAAGTATAGTTGCACCAAGTTATCCAATTGCAGCAGAGCTGGAAGGAGTCTTAAAGAAAGCGGAAGCCAAGGAATTTTATTACATGATTTTGTGTTTGTGAGTTCTTATGGAATAGACAATTACACTTCCATTGGAGAGGCTATTGCTGCTGCACCCAATAACACAAAGCCTGAAGATGGATATTTCCTTGTGTATGTTAGGGAGGGAATCTATGAAGAATATGTAGTAATTCCCAAAGAAAAAAAGAATATATTGCTTGTTGGAGATGGTATTAACAAGACTATCATCACAGGGAACCATAGTGTCATAGATGGTTGGACAACTTTCAATTCTTCCACATTTGCTGTTTCTGGAGAAAGGTTTATAGCAGTGGATGTTACATTCAGAAACACAGCTGGACCTGAAAAACACCAAGCAGTGGCAGTGAGGAACAATGCTGACCTCTCTACATTCTACCGTTGCAGTTTTGAAGGATATCAAGACACTCTCTATGTTCACTCTTTGAGGCAATTCTACAGAGAATGTGAAATCTATGGCACTGTGGACTTCATTTTCGGCAATGCAGCTGTGGTCTTCCAAGACAGTAAGATCTATGCCAGAAAACCATTGCCAAACCAGAAGAATGCCGTGACAGCACAAGGAAGAACTGATCCTAATCAGAACACTGGCATTTCAATCCAAAACTGCACCATTGATGCTGCACCAGACTTAGCTGCGGACTTGAATTCTACAGCAAGTTACTTAGGCCGGCCATGGAAGGTGTACTCAAGGACTGTCTACCTGCAGTCATATATTGGAAATGTTATTCAACCTGCAGGGTGGTTAGAGTGGAATGGCACAGTTGGGTTAGACACCCTTTTTTATGGTGAGTTTAACAACTATGGACCTGGTTCAAACACTAGCAGTAGAGTACAATGGCCTGGTTACTTTCTGTTGAATGCTACTCAAGCTTGGAACTTCACAGTCCTGAACTTTACTTTGGGAAATACATGGCTTCCTGACACAGATATACCTTACACTGAAGGACTGCTAAGATAG 1722 0.4466 MSSPSFFLLFLFFLLAPSLLAQSPPPSPSSSSSSSAVAAATCKATLYPKLCRSILSAIRASPSDPYGYGKFSIKQSLKQAHKLAKVFEDFLQRHQSSSSLNHAEVASLVDCRDLNNLNVDYLGSISEELKSAASSDSEVVQKIESYLSAVATNHYTCYDGLVVTKSTIANALALPLKGATQLYSVSLGLVTEALDKNLRRSKTRKHGLPTPTFKVRQPLEKLIKLLRTKYSCTKLSNCSRAGRSLKESGSQGILLHDFVFVSSYGIDNYTSIGEAIAAAPNNTKPEDGYFLVYVREGIYEEYVVIPKEKKNILLVGDGINKTIITGNHSVIDGWTTFNSSTFAVSGERFIAVDVTFRNTAGPEKHQAVAVRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRECEIYGTVDFIFGNAAVVFQDSKIYARKPLPNQKNAVTAQGRTDPNQNTGISIQNCTIDAAPDLAADLNSTASYLGRPWKVYSRTVYLQSYIGNVIQPAGWLEWNGTVGLDTLFYGEFNNYGPGSNTSSRVQWPGYFLLNATQAWNFTVLNFTLGNTWLPDTDIPYTEGLLR* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00175 573 Gene3D - 258 573 IPR012334 -
Phac5g00175 573 SMART PMEI_2 33 189 IPR006501 GO:0004857
Phac5g00175 573 SUPERFAMILY Pectin lyase-like 258 570 IPR011050 -
Phac5g00175 573 FunFam Pectinesterase 254 571 - -
Phac5g00175 573 PANTHER PECTINESTERASE 27 561 - -
Phac5g00175 573 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 191 IPR035513 -
Phac5g00175 573 ProSitePatterns Pectinesterase signature 2. 405 414 IPR033131 -
Phac5g00175 573 CDD PMEI-like_3 40 192 - -
Phac5g00175 573 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 192 IPR035513 -
Phac5g00175 573 Pfam Plant invertase/pectin methylesterase inhibitor 39 188 IPR006501 GO:0004857
Phac5g00175 573 NCBIfam pectinesterase inhibitor domain 6 169 IPR006501 GO:0004857
Phac5g00175 573 Pfam Pectinesterase 259 556 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00175 Phac-Chr5 1375484 1379678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00175 42 572 Carbohydrate Esterase AT3G10720 61.338 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00175 K01051 - gmx:100816503 1002.28