Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00139 ATGGAGAGGATTGTGGATGCAGATGGAAACATTGTATCTCAGCGTTCCTCATCTTCTTCAGTTGTTGCTCTGGCAATCAAGGGTAACAAGAAAAGCAAATATGTGGTACAGTGGGCACTTAATAAGTTTGTTCCTGAGGGAATGATTATCTTCAAGCTGATACATGTCCATGCTAGTATACAAGGAGTTCCAACGCCAACAACTGCATTCAGAAAGGAAGTGGAGTGGGAAAAAAACCAAATGCTGCTACCTTTCAAGAGATTGTGTGAGCAAAGAAAGGTGCATGTGGATGTTGTAGTGATTGAATCAGATGATGTGGCTATTGCAGTAGCAGAGGAAGTGGCTAAGGGTGCTATAACCAAACTTGTTGTTGGAGCTTCATCTAGTGGCATATTTAAAAGTAAACAGAAGGGTATGTCTATGAAAATATCAGTAAGCACTCCAAGATTTTGCACAGTTTATGCTATTTCGAAGGGAAAATTGTCCATTCGACAGTCCGACATGCCGATTGATGTAAGCATTATGGATGATGCTAGTGAAACCAGTTTTTCTTCCAGCAGCTCATCTAACTACACTTCCACCTCTCAGACAGAATCTACCTCAGTTTCATCATATGCTGGTTTACACTCGTCTTCTCTAGCAACACAACGATTTCAAGCTCTTTCAAGTATAAATAGTGCCCTTCTAAGCACAAATCCAAGTTTATCTGACACTAGCCATTCTAGAGGCCAATCTCTAGATCTTGGGAGAGAAAATACTGCTACCACCTCTGCAAGAAACTCAGACATTGATCATGCCATAAGCCGAGTCTCTAGTTGCAAAAGCTTTATTTCAGATACTGAATCTTGGATGTATGATCAAAATTCTATCAAGGATGTAGCACTAGCAACTACATTTCCATCACCTAATATGCAGGCAAAATTTAACCTTGAGCTGGAAAAGTTGAGAATTGAACTAAGACATGCCCAAGGACTGCATGCAGTAGCTCAAAGTGAGAAAACTGAAGCATGTCGGAAGCTGAATGACCTTAGCAAGAGACGATCAGAAGAAACCATGAAAATGAAGGAGATTGTTGCTAAGGAGGAGAAGGCAGAGGAATTAGCAAAACTAGAAAGTGAGAAATATCAGGATGCATCCAGAGAAGCTGTATATTTGAAAGAGTGTGCTGAAAGAGAGGCTGCAGAAAGGAAAGAAACAGAGTTGAGAGTCATCCGTGCTACAAAAGAGAAAGAAAAATTGGTGGATGCTCTAAGTGGTACAGTGTTGCAGTACCGGAAGTTTACATGGGATGAAATAGTCTCAGCTACTTCATCTTTTTCTGAAGATCTGAGAATTGGAATGGGAGCATATGGAACAGTGTACAAGTGCAATTTGTATCACACAACTGTTGCTGTTAAAGTTCTCAACACTAATGGAAATCGTGAAAGCAAGCAATTCCAACAGGAGTTAGAGGTATTAAGCAGAATACGTCATCCAAACTTGCTTCTTCTTCTTGGTGCATGTCATGATCATGGATGTCTTGTATATGAATATATGGAGAATGGTAACCTGGAGGACAGACTGCTGAGGAAAAACAACACTCCCCCAATCACATGGTTTGAGAGATTTCGAATAGCTTGGGAAATTGCATCAGCTCTCGCCTTCCTTCACAGCTCAAACCCGGAACCTATTATTCATCGTGACTTAAAACCAGCAAACATCTTGCTTGGTCGTAACCTTGTCAGCAAGATTGGTGACATTGGACTTTCTACAGTACTACATTCTGATAATTTATCTACCATGTTCAAGGACACAGCACCTGTTGGAACACTTTGCTACATTGATCCTGAGTACCAAAGGACCGGGTTAATATCTCCAAAGTCTGATGTTTATGCTTTTGGAATGGTGATCTTACAGTTATTGACAGCAAAACCAGCAATAGCACTTGCTCATAAAGTTGAAATTGCAATTGAAGGTGGGAATTTGACAGATATATTGGATCCAGAGGCAGGGGCTTGGCCGTTTAAAGAGACACTAGATTTGGCCTTGTTAGGACTGAGTTGTGCAGAACTTCGGCGTAGAGACCGGCCTGATTTAAAAGATCAAGTGCTTCCAACCCTTGAGAGATTGAAAGAAGTTGCTGATAGGGCCCAACATTCTGCTTCAACTGTTACTATTAAATCCAAACCTCCTAATCACTTTATCTGTCCAATTCTTCAGGATGTGATGGATGATCCTTGTGTTGCTGCTGATGGATATACATATGATCGCAAAGCAATTGAACAGTGGCTTCAAGAGAATGACAATTCACCAATGACAAACATGGCTTTACCTCACAAGCATTTAATTCCTAATTACACACTTTTGTCAGCAATTTTGGAGTGGAAGTCCAGAGAATCATAA 2382 0.4068 MERIVDADGNIVSQRSSSSSVVALAIKGNKKSKYVVQWALNKFVPEGMIIFKLIHVHASIQGVPTPTTAFRKEVEWEKNQMLLPFKRLCEQRKVHVDVVVIESDDVAIAVAEEVAKGAITKLVVGASSSGIFKSKQKGMSMKISVSTPRFCTVYAISKGKLSIRQSDMPIDVSIMDDASETSFSSSSSSNYTSTSQTESTSVSSYAGLHSSSLATQRFQALSSINSALLSTNPSLSDTSHSRGQSLDLGRENTATTSARNSDIDHAISRVSSCKSFISDTESWMYDQNSIKDVALATTFPSPNMQAKFNLELEKLRIELRHAQGLHAVAQSEKTEACRKLNDLSKRRSEETMKMKEIVAKEEKAEELAKLESEKYQDASREAVYLKECAEREAAERKETELRVIRATKEKEKLVDALSGTVLQYRKFTWDEIVSATSSFSEDLRIGMGAYGTVYKCNLYHTTVAVKVLNTNGNRESKQFQQELEVLSRIRHPNLLLLLGACHDHGCLVYEYMENGNLEDRLLRKNNTPPITWFERFRIAWEIASALAFLHSSNPEPIIHRDLKPANILLGRNLVSKIGDIGLSTVLHSDNLSTMFKDTAPVGTLCYIDPEYQRTGLISPKSDVYAFGMVILQLLTAKPAIALAHKVEIAIEGGNLTDILDPEAGAWPFKETLDLALLGLSCAELRRRDRPDLKDQVLPTLERLKEVADRAQHSASTVTIKSKPPNHFICPILQDVMDDPCVAADGYTYDRKAIEQWLQENDNSPMTNMALPHKHLIPNYTLLSAILEWKSRES* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00139 793 SUPERFAMILY RING/U-box 721 791 - -
Phac5g00139 793 CDD RING-Ubox_WDSUB1-like 724 778 - -
Phac5g00139 793 PANTHER OS02G0152300 PROTEIN 21 787 - -
Phac5g00139 793 ProSitePatterns Protein kinases ATP-binding region signature. 445 466 IPR017441 GO:0005524
Phac5g00139 793 SMART serkin_6 439 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g00139 793 Gene3D Transferase(Phosphotransferase) domain 1 512 722 - -
Phac5g00139 793 Coils Coil 361 381 - -
Phac5g00139 793 CDD STK_N 23 159 - -
Phac5g00139 793 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 723 793 IPR013083 -
Phac5g00139 793 SMART Ubox_2 726 788 IPR003613 GO:0004842|GO:0016567
Phac5g00139 793 SUPERFAMILY Protein kinase-like (PK-like) 421 693 IPR011009 -
Phac5g00139 793 Gene3D HUPs 11 139 IPR014729 -
Phac5g00139 793 ProSiteProfiles Protein kinase domain profile. 439 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g00139 793 Coils Coil 312 332 - -
Phac5g00139 793 Pfam U-box domain 724 791 IPR003613 GO:0004842|GO:0016567
Phac5g00139 793 Pfam Protein kinase domain 442 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g00139 793 ProSitePatterns Serine/Threonine protein kinases active-site signature. 557 569 IPR008271 GO:0004672|GO:0006468
Phac5g00139 793 MobiDBLite consensus disorder prediction 232 260 - -
Phac5g00139 793 Gene3D Phosphorylase Kinase; domain 1 418 511 - -
Phac5g00139 793 ProSiteProfiles U-box domain profile. 722 793 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00139 Phac-Chr5 1156683 1165132 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00139 19 790 U-box Gene Family AT4G25160 51.335 0.0 787
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Phac5g00139 Pkinase 2.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00139 - - gmx:100801699 1292.72