Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00123 ATGAATAATTTTTCTCATGTTCCCCCCGGTTTTAGGTTCCACCCCACTGATGAGGAACTTGTTGACTACTATCTGAGGAAGAAAATTACCTCAAGAAGGATTGACCTAGATGTCATAAAAGATGTTGACCTCTATAAAATTGAGCCATGGGATCTTCAAGAGCTTTGCAGAATAGGAACAGAAGAGCAAAATGAATGGTACTTCTTTAGCCATAAAGATAAGAAGTATCCAACAGGAACTCGCACAAATAGAGCAACAGCAGCTGGGTTTTGGAAAGCAACTGGAAGAGACAAAGCAATCTATTCAAAGCATGAGTTGATAGGGATGAGGAAAACCCTAGTCTTTTACAAAGGTCGAGCCCCCAATGGACAAAAATCAGATTGGATCATGCACGAATATCGACTTGAAACAGATGAAAATGGCACACCACAGCAGGAAGAAGGATGGGTTGTGTGTAGAGTATTCAAAAAGAGACTACCAACCATGCGTAAACTGAGTGAGCATGATTCTCCCTGTTGGTATGATGAGCAAGTCTCTTTCATGCAAGACATGGATTCACCAAAGCAAACCTCTCAACCTAATTTGCCCTACCACTTCCCATATCCATGCAAGAAAGAGCTAGATTTGCCATACCATTTGCCTCTCCACCTTCCATTGGAGAACCAAAAATTGCTTCAAACTGTCTCCAACTCAATCACACCATATCCTGAAGAAAACCATGTGATGCAGCAGCCAGTGTCATCAATCATGCAGCAGCAACAAGTTCAACACTCTTCTCAACAAAATTTTCATGCAGTGTTTGGAAACAATGTCAATGAACAAGTTGCTGATTGGAGAGCTCTTGACAAGTATGTTGCTTCACAGCTTAGCCAGGAAGATGCACCCAAAGAGAACAGTTACTCAAACACAGACAACAACAACATCTTTCATGTGAAGAACAATGACAATGTTGAACATTTGGGAGACTTGGACAAGGAGGAGATGATGCCTGAAAATGCCTCAACTTCAAACTCAAGCTGTCCAATTGACATGTGGAAATAG 1041 0.414 MNNFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHELIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQQEEGWVVCRVFKKRLPTMRKLSEHDSPCWYDEQVSFMQDMDSPKQTSQPNLPYHFPYPCKKELDLPYHLPLHLPLENQKLLQTVSNSITPYPEENHVMQQPVSSIMQQQQVQHSSQQNFHAVFGNNVNEQVADWRALDKYVASQLSQEDAPKENSYSNTDNNNIFHVKNNDNVEHLGDLDKEEMMPENASTSNSSCPIDMWK* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00123 346 MobiDBLite consensus disorder prediction 289 313 - -
Phac5g00123 346 MobiDBLite consensus disorder prediction 327 346 - -
Phac5g00123 346 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Phac5g00123 346 Gene3D NAC domain 16 159 IPR036093 GO:0003677|GO:0006355
Phac5g00123 346 MobiDBLite consensus disorder prediction 291 313 - -
Phac5g00123 346 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Phac5g00123 346 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 291 - -
Phac5g00123 346 FunFam NAC domain-containing protein 16 161 - -
Phac5g00123 346 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Phac5g00123 346 MobiDBLite consensus disorder prediction 330 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00123 Phac-Chr5 1036243 1042719 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00123 1 346 NAC Transcription Factor Family AT1G12260 57.382 2.42e-132 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac5g00123 NAM 3.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00123 - - gmx:100775867 563.533