Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00097 ATGGCTGGGATTGATGATAATGTTGCCCTTAGTGGCGATTGGGGTCTTGCTAGCCCAAGTCCAAGAACATTTTTCTCTAGAATGTTGGAGGAAGATCATGTAACAAGATCAGTCTCAGAACATTCTGGAAGTGGTAGAACTGGGGAATTCTTTTCAGGACCTCATGAGCCTAGTGAGACAGGGAAGAAAAACATGCAGGATGGAGCAGAAGATGGTGATTCTGGACCCCAAAAGTTGAACTCCAGGGGTGGTCTTGTGGAAAGAATGGCTGCTAGAGCTGGTTTCAATGCTCCTAGGTTGAACACTGAAAGCATTAGAACTACTGACCTTTCACTCAATTCTGACATTCACTCTCCTTACTTGACCATCCCACCAGGTCTCAGTCCTACCACACTTTTAGATTCTCCAGTCTTCCTTGCAAATTCACTGGCACAGCCATCTCCAACAACTGGAAAGTTTCTGTTTATGTCAAATGGCAACATGCGGCACTCAGAATTATCATCTGATGCTCCAGAAAAATGCAAAGATAATGGCTTTGATGATATCTATGCATCATCCTTTGCCTTCAAGCCAGCAACAGACTCAGGCTCCTCTTTCTATCATGGTGCTGGAAGAAAAATAAATCCAACTACAGTTCCTCAACAATCACGTCATGGTATCGAGGTTTCGGCTCAGTCAGAAAATTCCTTTCATTCTCAAAGTGTTGATGCTGTTAAAGTTCAAACTGAGAACAGAAGTGGTCTTCATCTTCAGGCAGACTTTGTCGAATCACCTCCCGAAAAAGATATTAAAATGTTTGCTGCTGATCAAAGGGCTTTTGATGCTGTTGGTGGTGGCATTGAACATTCTACTCCAGTTGAAGAGCATGGAGATGAAGAAGGAGATCAAAGAGGCAATGGAGATTCAGTGACTGGTGGCGTTGGGGGCACACCATCTGATGATGGATATAACTGGAGAAAATATGGCCAAAAGCAAGTGAAAGGCAGCGAGTACCCTCGAAGTTACTACAAGTGCACGCATCCAAACTGTCAGGTTAAGAAGAAAGTAGAACGATCTCATGAGGGCCATATAACCGAGATCATCTACAAGGGAACACACAACCATCCGAAACCTCCTCCCAATCGTCGGTCAGGTATAGGTTCGGTCAACCCTCACACTGAAATGCAAGTGGACAACCCTGAACATGTTGAATCACACAATGGTGGTGAGGGCGACATGGATTGGGGTAATGTACAAAAGGGAAATGTTGCTGGAGCTGCTAACTGGAAGCACGAAAACCTTGAAGCAACATCATCGGCATCTATTGGACCCGAGTACTGCAACCAGTCCACCAATTTGCAGAGTCAAAATGCTGGTACTCTCATTGATTCAGGAGAGGCAGTTGATGCCTCATCTACTTTTTCTAATGAAGAAGATGAAGACGACCGAGGCACACATGGTAGTGTATCATTAGGTTATGATGGGGAAGGAGATGAATCAGAGTCTAAGAGAAGGAAACTGGAATCATATGCAGACCTGAGTGGAGCTACTAGAGCCATCCGTGAGCCTAGAGTTGTTGTACAGACTACCAGTGAAGTAGATATCCTCGATGACGGTTATCGGTGGCGGAAGTATGGACAAAAAGTTGTCAAAGGAAATCCCAACCCAAGGAGTTATTACAAGTGCACAAATGCAGGCTGCACAGTAAGGAAACATGTGGAGAGAGCATCACATGACCTTAAATCCGTGATCACTACTTATGAGGGAAAGCACAACCATGATGTTCCTGCTGCTCGTGCCAGCAGCCATGTCAATGCTAACACTTCCAGTGCTGGCCAAGCTTCTGGTGTTCTTCACACCCATGTTCACAGACCTGAACCATCTCAAGTACACAATGGCATGGGAAGGCTTGAGAGGCCATCCCTCGGTTCGTTCAACCTACCCGGAAGGCAGCAGCTAGGACATTCCCATGGCTTCTCCTTCGGCATGAACCAACCCATGCTTTCAAATCTGGTGATGTCAGGGTTAGGTCACATGCAAGCAAAGCTCCCTGTTATGCCTGTTCATCCATTCTTAGCACAACAACAACAGCAGCAGCAACAGCAAAATCCTTCAAACGATTTTGGTTTCATGATGCCAAAGGGAGAGCCAAATGTGGAGGGTGGTGGTGGCCTTAACCTGCCAAATGGTTCATCAGTGTACCAAGAAATCATGAGTCGCATGCCCCTTGGACCTCACATGTAA 2223 0.4579 MAGIDDNVALSGDWGLASPSPRTFFSRMLEEDHVTRSVSEHSGSGRTGEFFSGPHEPSETGKKNMQDGAEDGDSGPQKLNSRGGLVERMAARAGFNAPRLNTESIRTTDLSLNSDIHSPYLTIPPGLSPTTLLDSPVFLANSLAQPSPTTGKFLFMSNGNMRHSELSSDAPEKCKDNGFDDIYASSFAFKPATDSGSSFYHGAGRKINPTTVPQQSRHGIEVSAQSENSFHSQSVDAVKVQTENRSGLHLQADFVESPPEKDIKMFAADQRAFDAVGGGIEHSTPVEEHGDEEGDQRGNGDSVTGGVGGTPSDDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGTHNHPKPPPNRRSGIGSVNPHTEMQVDNPEHVESHNGGEGDMDWGNVQKGNVAGAANWKHENLEATSSASIGPEYCNQSTNLQSQNAGTLIDSGEAVDASSTFSNEEDEDDRGTHGSVSLGYDGEGDESESKRRKLESYADLSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARASSHVNANTSSAGQASGVLHTHVHRPEPSQVHNGMGRLERPSLGSFNLPGRQQLGHSHGFSFGMNQPMLSNLVMSGLGHMQAKLPVMPVHPFLAQQQQQQQQQNPSNDFGFMMPKGEPNVEGGGGLNLPNGSSVYQEIMSRMPLGPHM* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00097 740 Pfam WRKY DNA -binding domain 313 369 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac5g00097 740 Pfam WRKY DNA -binding domain 530 586 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac5g00097 740 Gene3D WRKY domain 516 582 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac5g00097 740 SMART WRKY_cls 529 588 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac5g00097 740 SMART WRKY_cls 312 370 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac5g00097 740 ProSiteProfiles WRKY domain profile. 524 589 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac5g00097 740 ProSiteProfiles WRKY domain profile. 313 371 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac5g00097 740 MobiDBLite consensus disorder prediction 278 319 - -
Phac5g00097 740 SUPERFAMILY WRKY DNA-binding domain 521 589 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac5g00097 740 SUPERFAMILY WRKY DNA-binding domain 310 371 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac5g00097 740 MobiDBLite consensus disorder prediction 461 500 - -
Phac5g00097 740 MobiDBLite consensus disorder prediction 284 298 - -
Phac5g00097 740 MobiDBLite consensus disorder prediction 34 81 - -
Phac5g00097 740 MobiDBLite consensus disorder prediction 363 412 - -
Phac5g00097 740 MobiDBLite consensus disorder prediction 686 716 - -
Phac5g00097 740 FunFam WRKY transcription factor 33 516 582 - -
Phac5g00097 740 MobiDBLite consensus disorder prediction 686 701 - -
Phac5g00097 740 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 133 605 IPR044810 GO:0003700
Phac5g00097 740 Gene3D WRKY domain 303 372 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac5g00097 740 FunFam WRKY transcription factor 303 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00097 Phac-Chr5 814090 819302 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00097 1 735 WRKY Transcription Factor Family AT5G56270 49.609 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac5g00097 WRKY 3.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00097 K18835 - gmx:100127395 1250.34