Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00071 ATGTCGATGCTGCTGAGGAAGGCTTGGGAAATGGTGTTGTGGAGATCTGATTCATCAACGTCAGCATCAGCATCATCATCAACAACAACTACAACAAGATTTTCACTGGAAGTGGCACGTTCTGACATGGGTGAATTGGAGCAGCTACCCAGTGACATCTTGATGCAAATTCTGAAGCTTTTGGGTCCAAAAGCGGTTGCAAAATTGAGTGTGGTTTGCAAGAGTTTGAGATCCATTGTCTCTGATAACAGACTTTGGATTTACTTCATTCAGACCCATCAGGCTGAACCTTCTGGGGATTCTGTGTTCTTTGCTGAGACCACCTTGAGCTCTGGCTACCCTCTTCCAGCTTACGTTGGTCACTGGCCCCAGCTATCATTCAAGCATATTTATGGCCAGAGAGCACAAGTTCCTGGTTCTATTATTATTGATGGTGGTTCTGGCTACTGCAAATTTGGCTGGAGCAAATACGAATGCCCATCTGGTCGATCAGCAACATTTTTGGAGTTTGGCAACATTGAGTCTCCAATGTATACTAGGCTTCGACATTTTTTTGCAACTATTTATAACAGGATGCAGGTGAAACCAAATAAACAACCAGTTATTGTTTCAGTACCAATATGTCATTATGAAGATACTCAATCAGCAAAAGCTTCAAGACGACAGCTTAAAGATGCAATCTACGCCTCCTTGTTTGACATGAATGTTCCTGCTGTTTGTGCTGTCAACCAGGCCACTCTAGCTCTGTACGCTGCAAAACGAACTTCTGGAATAGTTGTTAATATAGGTTTTCAAGTCACTTCTATAGTTCCAATTTTAAATGGTAAAGTAATGCGCAAGGTGGGTGTGGAAGTTGTGGGGCTGGGAGCACTGAAACTTACCGGATTTCTCAGGGAGAAGATGCAATTGAACAACTTAACTTTTCAGTCTTTGTACACTGTTCGCACACTGAAAGAGAAGCTATGCTATGTTGCACATGATTATGAAGCTGAGCTATCAAAAGATACAAAAGCATCATATGAAGCTGCAGGAGAAGGATGGTTTACCCTCTCAAAAGAGAGGTTTCAGACACCAGAGATCTTATTCCAGCCTCATTTTGCTGGAGTGTTGATGTTACCAATTTTTCATCTTTAA 1134 0.4206 MSMLLRKAWEMVLWRSDSSTSASASSSTTTTTRFSLEVARSDMGELEQLPSDILMQILKLLGPKAVAKLSVVCKSLRSIVSDNRLWIYFIQTHQAEPSGDSVFFAETTLSSGYPLPAYVGHWPQLSFKHIYGQRAQVPGSIIIDGGSGYCKFGWSKYECPSGRSATFLEFGNIESPMYTRLRHFFATIYNRMQVKPNKQPVIVSVPICHYEDTQSAKASRRQLKDAIYASLFDMNVPAVCAVNQATLALYAAKRTSGIVVNIGFQVTSIVPILNGKVMRKVGVEVVGLGALKLTGFLREKMQLNNLTFQSLYTVRTLKEKLCYVAHDYEAELSKDTKASYEAAGEGWFTLSKERFQTPEILFQPHFAGVLMLPIFHL* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00071 377 Gene3D Actin; Chain A, domain 4 290 368 - -
Phac5g00071 377 SUPERFAMILY Actin-like ATPase domain 254 376 IPR043129 -
Phac5g00071 377 PANTHER ACTIN 181 369 IPR004000 -
Phac5g00071 377 Pfam F-box domain 47 87 IPR001810 GO:0005515
Phac5g00071 377 CDD NBD_sugar-kinase_HSP70_actin 141 285 - -
Phac5g00071 377 Gene3D - 137 254 - -
Phac5g00071 377 ProSiteProfiles F-box domain profile. 43 89 IPR001810 GO:0005515
Phac5g00071 377 Gene3D - 36 136 - -
Phac5g00071 377 Pfam Actin 187 367 IPR004000 -
Phac5g00071 377 SMART fbox_2 49 89 IPR001810 GO:0005515
Phac5g00071 377 Gene3D - 257 289 - -
Phac5g00071 377 SUPERFAMILY Actin-like ATPase domain 140 260 IPR043129 -
Phac5g00071 377 SMART actin_3 138 375 IPR004000 -
Phac5g00071 377 SUPERFAMILY F-box domain 41 97 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00071 Phac-Chr5 655247 661494 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00071 187 369 Cytoskeleton Gene Families AT3G12110 32.984 5.38e-23 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00071 K16616 - gmx:100791973 632.869